All Publications

  • The gut microbiome and hypertension

    Meirav Pevsner-Fischer; E Blacher; Evgeny Tatirovsky; IZ Ben-Dov; Eran Elinav (2017)
    (Publication id: 000050021)
  • Large-scale mapping of gene regulatory logic reveals context-dependent repression by transcriptional activators

    Dijk, David Van Dijk; Eilon Sharon; Maya Lotan-Pompan; Adina Weinberger; Eran Segal; LB Carey (2017)
    (Publication id: 000050024)
  • Transcriptional programs that control expression of the autoimmune regulator gene Aire

    Yonatan Herzig; Shir Nevo; Chamutal Bornstein; Miriam R. Brezis; Sharon Ben-Hur; Aya Shkedy; Michal Eisenberg-Bord; Ben Levi; Michael Delacher; Yael Goldfarb; Eyal David; Leehee Weinberger; Sergey Viukov; Shifra Ben-Dor; Matthieu Giraud; Jacob H. Hanna; Achim Breiling; Frank Lyko; Ido Amit; Markus Feuerer; Jakub Abramson (2017)
    (Publication id: 000050233)
  • Optimality and sub-optimality in a bacterial growth law

    Benjamin D. Towbin; Yael Korem; Anat Bren; Shany Doron; Rotem Sorek; Uri Alon (2017)
    (Publication id: 000050237)
  • CD74 is a novel transcription regulator

    Naama Gil-Yarom; Lihi Radomir; Lital Sever; Matthias P. Kramer; Hadas Lewinsky; Chamutal Bornstein; Ronnie Blecher-Gonen; Itzhaki, Zohar Barnett Itzhaki; Vita Mirkin; Gilgi Friedlander; Lev Shvidel; Yair Herishanu; Elias J. Lolis; Herman, Shirly Becker Herman; Ido Amit; Idit Shachar (2017)
    (Publication id: 000050239)
  • GAS6 is a key homeostatic immunological regulator of host-commensal interactions in the oral mucosa

    Maria Nassar; Yaara Tabib; Tal Capucha; Gabriel Mizraji; Tsipora Nir; Meirav Pevsner-Fischer; Gili Zilberman-Schapira; Oded Heyman; Gabriel Nussbaum; Herve Bercovier; Asaf Wilensky; Eran Elinav; Tal Burstyn-Cohen; Avi-Hai Hovav (2017)
    (Publication id: 000050240)
  • Microbiome-Modulated Metabolites at the Interface of Host Immunity

    Eran Blacher; Maayan Levy; Evgeny Tatirovsky; Eran Elinav (2017)
    (Publication id: 000050241)
  • Breaking the population barrier by single cell analysis: one host against one pathogen

    Erez Mills; Roi Avraham (2017)
    (Publication id: 000050280)
  • A pathway of targeted autophagy is induced by DNA damage in budding yeast

    Vinay V. Eapen; David P. Waterman; Amelie Bernard; Nathan Schiffmann; Enrich Sayas; Roarke Kamber; Brenda Lemos; Gonen Memisoglu; Jessie Ang; Allison Mazella; Silvia G. Chuartzman; Robbie J. Loewith; Maya Schuldiner; Vladimir Denic; Daniel J. Klionsky; James E. Haber (2017)
    (Publication id: 000050294)
  • Ground control to major TOM: mitochondria-nucleus communication

    Michal Eisenberg-Bord; Maya Schuldiner (2017)
    (Publication id: 000050334)
  • Cap-proximal nucleotides via differential eIF4E binding and alternative promoter usage mediate translational response to energy stress

    Ben Harush, Ana Tamarkin Ben Harush; Jean-Jacques Vasseur; Francoise Debart; Igor Ulitsky; Rivka Dikstein (2017)
    (Publication id: 000050300)
  • Combining Deep Sequencing, Proteomics, Phosphoproteomics, and Functional Screens To Discover Novel Regulators of Sphingolipid Homeostasis

    Nicolas Lebesgue; Marton Megyeri; Alba Cristobal; Arjen Scholten; Silvia G. Chuartzman; Yoav Voichek; Richard A. Scheltema; Shabaz Mohammed; Anthony H. Futerman; Maya Schuldiner; Albert J. R. Heck; Simone Lemeer (2017)
    (Publication id: 000050306)
  • Dysbiosis and the immune system

    Maayan Levy; Aleksandra A. Kolodziejczyk; Christoph Alexander Thaiss; Eran Elinav (2017)
    (Publication id: 000050591)
  • Dynamic proteomics reveals bimodal protein dynamics of cancer cells in response to HSP90 inhibitor

    Anat Zimmer; Farkash, Shlomit Amar Farkash; Tamar Danon; Uri Alon (2017)
    (Publication id: 000050610)
  • Dynamic zonation of liver polyploidy

    Sivan Tanami; Moshe, Shani Ben Moshe; Anat Elkayam; Avi Mayo; Keren Bahar Halpern; Shalev Itzkovitz (2017)
    (Publication id: 000055086)
  • Autonomous TNF is critical for in vivo monocyte survival in steady state and inflammation

    Simon Yona; Eyal David; Ki-Wook Kim; Tobias Goldmann; Ido Amit; Mathias Heikenwalder; Sergei Nedospasov; Marco Prinz; Nir Friedman; Steffen Jung (2017)
    (Publication id: 000050665)
  • Innate Immune Landscape in Early Lung Adenocarcinoma by Paired Single-Cell Analyses

    Yonit Lavin; Soma Kobayashi; Andrew Leader; El-ad David Amir; Naama Elefant; Camille Bigenwald; Romain Remark; Robert Sweeney; Christian D. Becker; Jacob H. Levine; Klaus Meinhof; Andrew Chow; Seunghee Kim-Shulze; Andrea Wolf; Chiara Medaglia; Hanjie Li; Julie A. Rytlewski; Ryan O. Emerson; Alexander Solovyov; Benjamin D. Greenbaum; Catherine Sanders; Marissa Vignali; Mary Beth Beasley; Raja Flores; Sacha Gnjatic; Dana Pe'er; Adeeb Rahman; Ido Amit; Miriam Merad (2017)
    (Publication id: 000055082)
  • Systematic, multiparametric analysis of Mycobacterium tuberculosis intracellular infection offers insight into coordinated virulence

    AK Barczak; Roi Avraham; SS Luo; WR Zhang; MA Bray; AE Hinman; M Thompson; RM Nietupski; A Golas; P Montgomery; M Fitzgerald; RS Smith; DW White; AD Tischler; AE Carpenter; DT Hung; Saurabh Singh (2017)
    (Publication id: 000055147)
  • Genomic Characterization of Murine Monocytes Reveals C/EBP beta Transcription Factor Dependence of Ly6C(-) Cells

    Alexander Mildner; Joerg Schoenheit; Amir Giladi; Eyal David; Astiaso, David Lara Astiaso; Vivas, Erika Lorenzo Vivas; Franziska Paul; Louise Chappell-Maor; Josef Priller; Achim Leutz; Ido Amit; Steffen Jung (2017)
    (Publication id: 000055194)
  • Cap-binding protein 4EHP effects translation silencing by microRNAs

    Clement Chapat; Seyed Mehdi Jafarnejad; Edna Matta-Camacho; Geoffrey G. Hesketh; Idit A. Gelbart; Jan Attig; Christos G. Gkogkas; Tommy Alain; Noam Stern-Ginossar; Marc R. Fabian; Anne-Claude Gingras; Thomas F. Duchaine; Nahum Sonenberg (2017)
    (Publication id: 000055208)
  • Systematic Epigenomic Analysis Reveals Chromatin States Associated with Melanoma Progression

    Petko Fiziev; Kadir C. Akdemir; John P. Miller; Emily Z. Keung; Neha S. Samant; Sneha Sharma; Christopher A. Natale; Christopher J. Terranova; Mayinuer Maitituoheti; Samirkumar B. Amin; Emmanuel Martinez-Ledesma; Mayura Dhamdhere; Jacob B. Axelrad; Amiksha Shah; Christine S. Cheng; Harshad Mahadeshwar; Sahil Seth; Michelle C. Barton; Alexei Protopopov; Kenneth Y. Tsai; Michael A. Davies; Benjamin A. Garcia; Ido Amit; Lynda Chin; Jason Ernst; Kunal Rai (2017)
    (Publication id: 000055240)
  • Expansion-restriction of Spemann's organizer by an ADMP self-regulatory switch to scale the BMP gradient

    Abraham Fainsod; Avi Leibovich; Hadas Leibovich-Kot; Danny Ben-Zvi; Naama Barkai (2017)
    (Publication id: 000055269)
  • Bread Affects Clinical Parameters and Induces Gut Microbiome-Associated Personal Glycemic Responses

    Tal Korem; David Zeevi; Niv Zmora; Omer Weissbrod; Noam Bar; Maya Lotan-Pompan; Sagi, Tali Avnit Sagi; Noa Kosower; Gal Malka; Michal Rein; Jotham Suez; Ben Z. Goldberg; Adina Weinberger; Avraham Levy; Eran Elinav; Eran Segal (2017)
    (Publication id: 000055282)
  • The Genetic Requirements for Pentose Fermentation in Budding Yeast

    Karin Mittelman; Naama Barkai (2017)
    (Publication id: 000055291)
  • Energetic cost of building a virus

    Gita Mahmoudabadi; Ron Milo; Rob Phillips (2017)
    (Publication id: 000055307)
  • Exhaustive search of linear information encoding protein-peptide recognition

    Abdellali Kelil; Benjamin Dubreuil; Emmanuel Doram Levy; Stephen W. Michnick (2017)
    (Publication id: 000055323)
  • Inflammasomes and intestinal inflammation

    Niv Zmora; Matan Levy; Meirav Pevsner-Fischer; Eran Elinav (2017)
    (Publication id: 000055349)
  • A Unique Microglia Type Associated with Restricting Development of Alzheimer's Disease

    Hadas Keren-Shaul; Amit Spinrad; Assaf Weiner; Orit Matcovitch-Natan; Raz Dvir-Szternfeld; Tyler K. Ulland; Eyal David; Kuti Baruch; David Lara-Astaiso; Beata Toth; Shalev Itzkovitz; Marco Colonna; Michal Schwartz; Ido Amit (2017)
    (Publication id: 000055355)
  • Immunology, one cell at a time

    Amir Giladi; Ido Amit (2017)
    (Publication id: 000055582)
  • Cell-cycle dynamics of chromosomal organization at single-cell resolution

    Takashi Nagano; Yaniv Lubling; Csilla Varnai; Carmel Dudley; Wing Leung; Yael Baran; Netta Mendelson Cohen; Steven Wingett; Peter Fraser; Amos Tanay (2017)
    (Publication id: 000055583)
  • MicroRNA-142 controls thymocyte proliferation

    Alexander Mildner; Elik Chapnik; Diana Varol; Tegest Aychek; Nardi Lampl; Natalia Rivkin; Anita Bringmann; Franziska Paul; Sigalit Boura-Halfon; Yifat Segal Hayoun; Itzhaki, Zohar Barnett Itzhaki; Ido Amit; Eran Hornstein; Steffen Jung (2017)
    (Publication id: 000055587)
  • Biphasic response as a mechanism against mutant takeover in tissue homeostasis circuits

    Omer Karin; Uri Alon (2017)
    (Publication id: 000055632)
  • Definition of a High-Confidence Mitochondrial Proteome at Quantitative Scale

    Marcel Morgenstern; Sebastian B. Stiller; Philipp Luebbert; Christian D. Peikert; Stefan Dannenmaier; Friedel Drepper; Uri Weill; Philipp Hoess; Reinhild Feuerstein; Michael Gebert; Maria Bohnert; der Laan, Martin van der Laan; Maya Schuldiner; Conny Schuetze; Silke Oeljeklaus; Nikolaus Pfanner; Nils Wiedemann; Bettina Warscheid (2017)
    (Publication id: 000055610)
  • THE YING AND YANG OF JAK SIGNALING: LOSS OF USP9X BUFFERS JAK SIGNALING AND ENHANCES SURVIVAL OF CRLF2-JAK-STAT EXPRESSING B CELL PRECURSOR ACUTE LYMPHOBLASTIC LEUKEMIA

    O. Schwartzman; A. M. Savino; M. Gombert; C. Palmi; G. Cario; M. Schrappe; C. Eckert; Stackelberg, A. von Stackelberg; J. -Y. Huang; M. Hameiri-Grossman; S. Avigad; G. te Kronnie; I. Geron; Y. Birger; A. Rein; G. Zarfati; U. Fischer; M. Stanulla; A. Biondi; G. Cazzaniga; B. Wagner; Z. Chen; S. Chen; Amos Tanay; A. Borkhardt; S. Izraeli (2017)
    (Publication id: 000055612)
  • Cellular Consequences of Diminished Protein O-Mannosyltransferase Activity in Baker's Yeast

    Ewa Zatorska; Lihi Gal; Jaro Schmitt; Daniela Bausewein; Maya Schuldiner; Sabine Strahl (2017)
    (Publication id: 000055638)
  • Dicer Deficiency Differentially Impacts Microglia of the Developing and Adult Brain

    Diana Varol; Alexander Mildner; Thomas Blank; Anat Shemer; Neta Barashi; Simon Yona; Eyal David; Sigalit Boura-Halfon; Yifat Segal-Hayoun; Louise Chappell-Maor; Hadas Keren-Shaul; Dena Leshkowitz; Eran Hornstein; Martin Fuhrmann; Ido Amit; Nicola Maggio; Marco Prinz; Steffen Jung (2017)
    (Publication id: 000055622)
  • Post-dieting weight gain: the role of persistent microbiome changes

    Christoph Alexander Thaiss; Hagit Shapiro; Eran Elinav (2017)
    (Publication id: 000055629)
  • Microbiome, metabolites and host immunity

    Maayan Levy; Eran Blacher; Eran Elinav (2017)
    (Publication id: 000055653)
  • Efficient and Accurate Translation Initiation Directed by TISU Involves RPS3 and RPS10e Binding and Differential Eukaryotic Initiation Factor 1A Regulation

    Ora Haimov; Hadar Sinvani; Franck Martin; Igor Ulitsky; Rafi Emmanuel; Ben Harush, Ana Tamarkin Ben Harush; Assaf Vardy; Rivka Dikstein (2017)
    (Publication id: 000055752)
  • The path towards microbiome-based metabolite treatment

    Jotham Suez; Eran Elinav (2017)
    (Publication id: 000055762)
  • Creative foraging: An experimental paradigm for studying exploration and discovery

    Yuval Hart; Avraham E. Mayo; Ruth Mayo; Liron Rozenkrantz; Avichai Tendler; Uri Alon; Lior Noy (2017)
    (Publication id: 000055815)
  • MICROBIOLOGY Intracellular signaling in CRISPR-Cas defense

    Gil Amitai; Rotem Sorek (2017)
    (Publication id: 000055809)
  • Genome-wide identification and expression profiling of long non-coding RNAs in auditory and vestibular systems

    Kathy Ushakov; Tal Koffler-Brill; Aviv Rom; Kobi Perl; Igor Ulitsky; Karen B. Avraham (2017)
    (Publication id: 000055873)
  • Editorial overview: Systems biology for biotechnology

    Matthias Heinemann; Yitzhak Pilpel (2017)
    (Publication id: 000055876)
  • Lessons on enzyme kinetics from quantitative proteomics

    Dan Davidi; Ron Milo (2017)
    (Publication id: 000055877)
  • Spatial transcriptomics: paving the way for tissue-level systems biology

    Andreas E. Moor; Shalev Itzkovitz (2017)
    (Publication id: 000055878)
  • Syp1 regulates the clathrin-mediated and clathrin-independent endocytosis of multiple cargo proteins through a novel sorting motif

    Amanda Reider Apel; Kyle Hoban; Silvia Chuartzman; Raffi Tonikian; Sachdev Sidhu; Maya Schuldiner; Beverly Wendland; Derek Prosser (2017)
    (Publication id: 000061609)
  • Placebo can enhance creativity

    Liron Rozenkrantz; Avraham E. Mayo; Tomer Ilan; Yuval Hart; Lior Noy; Uri Alon (2017)
    (Publication id: 000061603)
  • Evidence for a cytoplasmic pool of ribosome-free mRNAs encoding inner membrane proteins in Escherichia coli

    Daniel Benhalevy; Ido Biran; Elena S. Bochkareva; Rotem Sorek; Eitan Bibi (2017)
    (Publication id: 000061625)
  • Principles of cellular resource allocation revealed by condition-dependent proteome profiling

    Eyal Metzl-Raz; Moshe Kafri; Gilad Yaakov; Ilya Soifer; Yonat Gurvich; Naama Barkai (2017)
    (Publication id: 000061617)
  • Potential role of intratumor bacteria in mediating tumor resistance to the chemotherapeutic drug gemcitabine

    Leore T. Geller; Michal Barzily-Rokni; Tal Danino; Oliver H. Jonas; Noam Shental; Deborah Nejman; Nancy Gavert; Yaara Zwang; Zachary A. Cooper; Kevin Shee; Christoph A. Thaiss; Alexandre Reuben; Jonathan Livny; Roi Avraham; Dennie T. Frederick; Matteo Ligorio; Kelly Chatman; Stephen E. Johnston; Carrie M. Mosher; Alexander Brandis; Garold Fuks; Candice Gurbatri; Vancheswaran Gopalakrishnan; Michael Kim; Mark W. Hurd; Matthew Katz; Jason Fleming; Anirban Maitra; David A. Smith; Matt Skalak; Jeffrey Bu; Monia Michaud; Sunia A. Trauger; Iris Barshack; Talia Golan; Judith Sandbank; Keith T. Flaherty; Anna Mandinova; Wendy S. Garrett; Sarah P. Thayer; Cristina R. Ferrone; Curtis Huttenhower; Sangeeta N. Bhatia; Dirk Gevers; Jennifer A. Wargo; Todd R. Golub; Ravid Straussman (2017)
    (Publication id: 000061657)
  • Iron affects Ire1 clustering propensity and the amplitude of endoplasmic reticulum stress signaling

    Nir Cohen; Michal Breker; Anush Bakunts; Kristina Pesek; Ainara Chas; Josepmaria Argemi; Andrea Orsi; Lihi Gal; Silvia Chuartzman; Yoav Wigelman; Felix Jonas; Peter Walter; Robert Ernst; Tomas Aragon; Anken, Eelco van Anken; Maya Schuldiner (2017)
    (Publication id: 000061682)
  • Sub-cellular mRNA localization modulates the regulation of gene expression by small RNAs in bacteria

    Hamid Teimouri; Elgin Korkmazhan; Joel Stavans; Erel Levine (2017)
    (Publication id: 000061683)
  • The remedy within: will the microbiome fulfill its therapeutic promise?

    Christoph Alexander Thaiss; Eran Elinav (2017)
    (Publication id: 000061685)
  • Saccharomyces cerevisiae cells lacking Pex3 contain membrane vesicles that harbor a subset of peroxisomal membrane proteins

    Justyna P. Wroblewska; Luis Daniel Cruz-Zaragoza; Wei Yuan; Andreas Schummer; Silvia G. Chuartzman; Boer, Rinse de Boer; Silke Oeljeklaus; Maya Schuldiner; Einat Zalckvar; Bettina Warscheid; Ralf Erdmann; der Klei, Ida J. van der Klei (2017)
    (Publication id: 000061686)
  • Maya Schuldiner

    Maya Schuldiner (2017)
    (Publication id: 000061708)
  • Two novel effectors of trafficking and maturation of the yeast plasma membrane H+-ATPase

    Yosef Geva; Jonathan Crissman; Eric C. Arakel; Natalia Gomez-Navarro; Silvia G. Chuartzman; Kyle R. Stahmer; Blanche Schwappach; Elizabeth A. Miller; Maya Schuldiner (2017)
    (Publication id: 000061690)
  • Global mRNA polarization regulates translation efficiency in the intestinal epithelium

    Andreas E. Moor; Matan Golan; Efi E. Massasa; Doron Lemze; Tomer Weizman; Rom Shenhav; Shaked Baydatch; Orel Mizrahi; Roni Winkler; Ofra Golani; Noam Stern-Ginossar; Shalev Itzkovitz (2017)
    (Publication id: 000061711)
  • Sequence features of viral and human Internal Ribosome Entry Sites predictive of their activity

    Alexey A. Gritsenko; Shira Weingarten-Gabbay; Shan Elias-Kirma; Ronit Nir; Ridder, Dick De Ridder; Eran Segal (2017)
    (Publication id: 000061734)
  • Mef2C restrains microglial inflammatory response and is lost in brain ageing in an IFN-I-dependent manner

    Aleksandra Deczkowska; Orit Matcovitch-Natan; Afroditi Tsitsou-Kampeli; Sefi Ben-Hamo; Raz Dvir-Szternfeld; Amit Spinrad; Oded Singer; Eyal David; Deborah R. Winter; Lucas K. Smith; Alexander Kertser; Kuti Baruch; Neta Rosenzweig; Anna Terem; Marco Prinz; Saul Villeda; Ami Citri; Ido Amit; Michal Schwartz (2017)
    (Publication id: 000061699)
  • Mapping organelle contact sites

    Maya Schuldiner (2017)
    (Publication id: 000061740)
  • Robust design of biological timers shapes neuroblast lineage formation in the drosophila embryo

    Inna Averbukh; S. Lai; Ben-Zion Shilo; C. Doe; Naama Barkai (2017)
    (Publication id: 000061741)
  • Principles of Systems Biology, No. 21

    Junyue Cao; Jonathan Packer; Robert Waterston; Cole Trapnell; Jay Shendure; Satwik Rajaram; Lani F. Wu; Steven J. Altschuler; Jackson Liang; Lucy Erin O'Brien; Inbal Eizenberg-Magar; Jacob Rimer; Nir Friedman; Eyal Metzl-Raz; Moshe Kafri; Gilad Yaakov; Ilya Soifer; Yonat Gurvich; Naama Barkai; Adil Mardinoglu; Fredrik Ponten; Mathias Uhlen; Sahand Jamal Rahi; Frederick R. Cross; Meike Baumgart; Stephan Noack (2017)
    (Publication id: 000061703)
  • Single cell epigenomics

    Amos Tanay (2017)
    (Publication id: 000061742)
  • Heterosis as a consequence of regulatory incompatibility

    D. Bar-Zvi; Rebecca Hannah Herbst; Sharon Reikhav; Ilya Soifer; Michal Breker; Ghil Jona; Eyal Shimoni; Maya Schuldiner; Asaf Levy; Naama Barkai (2017)
    (Publication id: 000061744)
  • Chromatin dynamics During DNA replication

    Naama Barkai (2017)
    (Publication id: 000061745)
  • Evolthon: the first experimental evolution community challenge

    Sivan Kaminski; D. Schirman; Orna Dahan; Yitzhak Pilpel (2017)
    (Publication id: 000061746)
  • The molecular basis for yeast persisters

    Gilad Yaakov; David Lerner; Kajetan Bentele; Joseph M. Steinberger; Naama Barkai (2017)
    (Publication id: 000061766)
  • Principles of cellular resource allocation revealed by condition-dependent proteome profiling

    E. Metzl-Raz; Moshe Kafri; Gilad Yaakov; Ilya Soifer; Yonat Gurvich; Naama Barkai (2017)
    (Publication id: 000061786)
  • Characterizing the interaction and dynamics between duplicated transcription factors

    Sagie Brodsky; Naama Barkai (2017)
    (Publication id: 000061787)
  • Decoding HCMV latent gene expression program using single cell transcriptomics

    Marina Shnayder; A. Nachshon; Michal Schwartz; Noam Stern-Ginossar (2017)
    (Publication id: 000061768)
  • Exploring horizontal gene transfer through in-lab evolution

    Orna Dahan; Itamar Francoise; Tammy Biniashvili; S. Slomka; Yitzhak Pilpel (2017)
    (Publication id: 000061788)
  • Global mRNA polarization regulates translation efficiency in the intestinal epithelium

    A. Moor; Matan Golan; Doron Lemze; T. Weizman; Efi Massasa; R. Shenhav; Shaked Baydatch; Orel Mizrahi; Roni Winkler; Ofra Golani; Noam Stern-Ginossar; Shalev Itzkovitz (2017)
    (Publication id: 000061750)
  • Distinct ubiquitination signatures of serum proteins in Systemic Lupus Erythematosus

    Avital Eisenberg-Lerner; Yifat Merbl (2017)
    (Publication id: 000061769)
  • Duplication of transcription factors enables a low-noise transcription system

    Michal Chapal; Sefi Mintzer; Miriam Carmi; Sagie Brodsky; Naama Barkai (2017)
    (Publication id: 000061789)
  • Cell cycle dependent expression variation between yeast species

    Offir Lupo; Naama Barkai; Asaf Levy (2017)
    (Publication id: 000061790)
  • Expression homeostasis during DNA replication

    Yoav Voichek; R. Bar-Ziv; Naama Barkai (2017)
    (Publication id: 000061791)
  • Molecular determinants of a lipid droplet subpopulation at the contact site between the nucleus and vacuole

    M. Eisenberg-Bord; Uri Weill; M. Mari; I. G. Castro; Eden Rosenfeld-Gur; Ofer Moldavski; K. G. Soni; Nofar Harpaz; T. P. Levine; Anthony H. Futerman; F. Reggiore; V. A. Bankaitis; M. Bohnert; Maya Schuldiner (2017)
    (Publication id: 000061752)
  • A sequence element enriched in Alu repeats drives nuclear localization of long RNAs in human cells

    Yoav Lubelsky; Igor Ulitsky (2017)
    (Publication id: 000061772)
  • Decoding the evolution of transcriptional networks

    G. Krieger; Naama Barkai; A. A. Levy (2017)
    (Publication id: 000061792)
  • Unraveling cis-regulatory elements by mapping structural changes in mRNAs

    Orel Mizrahi; A. Nachshon; Alina Shitrit; I. Gelbart; Noam Stern-Ginossar (2017)
    (Publication id: 000061773)
  • Evolutionary trade-offs in tumor development

    Jean Hausser; Pablo Szekely; Nadav Bar; A. Tzimmer; C. Caldas; Uri Alon (2017)
    (Publication id: 000061795)
  • The HCMV long non coding RNA 4.9 is important for viral DNA replication

    Adi Ezra; J. Tai-Schmiedel; Sharon Karniely; Erez Eliyahu; Noam Stern-Ginossar (2017)
    (Publication id: 000061776)
  • Systematic identification and functional characterization of contact site resident proteins in Saccharomyces cerevisiae

    I. G. Castro; Uri Weill; Nofar Harpaz; Nadav Shai; Maya Schuldiner (2017)
    (Publication id: 000061777)
  • The role of expression homeostasis mechanism in regulation of total mRNA levels during cell cycle

    Yulia Gordon; Naama Barkai (2017)
    (Publication id: 000061758)
  • Splicing efficiency and sub-cellular localization of coding and long non-coding RNAs

    B. Zuckerman; Igor Ulitsky (2017)
    (Publication id: 000061797)
  • Post-translation regulations can induce correlated fluctuations of protein levels in single cells

    Or Matalon; Jean Hausser; Avital Steinberg; Ehud Sass; Emmanuel Doram Levy (2017)
    (Publication id: 000061801)
  • PerMit to contact - a systematic tool for studying organelle proximity unravels the molecular machinery of peroxisome-mitochondria contact sites

    Nadav Shai; E. Yifrach; Roermund, C. W. van Roermund; L. Cavellini; R. Schuster; Lior Zada; A. Hughes; M. Escobar-Henriques; Merav Cohen; H. Waterham; R. Wanders; Maya Schuldiner; Einat Zalckvar (2017)
    (Publication id: 000061763)
  • Time line redox profiling of yeast cell subpopulations using fluorescence based cell sorting methodology

    M. Radzinski; R. Fassler; Orit Yogev; W. Breuer; Nadav Shai; Maya Schuldiner; T. Ravid; D. Reichmann (2017)
    (Publication id: 000061783)
  • PDB-wide annotation of biological assemblies from full quaternary structure superposition

    Sucharita Dey; D. Ritchie; Emmanuel Doram Levy (2017)
    (Publication id: 000061805)
  • Gene architectures that minimize cost of gene expression

    Idan Frumkin; D. Schirman; Aviv Rotman; Yitzhak Pilpel (2017)
    (Publication id: 000061785)
  • One library to make them all: streamlining yeast library creation by a SWAp-Tag (SWAT) strategy

    Uri Weill; Ido Yofe; Maya Schuldiner (2017)
    (Publication id: 000061809)
  • Diversity of antiviral defense strategies of bacteria at the population level

    A. Lopatina; A. Millman; E. Abram; S. Silverman; Sarah Melamed; Azita Leavitt; Rotem Sorek (2017)
    (Publication id: 000061811)
  • A multiplexed screening method for pluripotency

    Alexander Plotnikov; Noga Kozer; Vladislav Krupalnik; Shani Peles; Nofar Mor; Yoach Rais; Jacob H. Hanna; Haim M. Barr (2017)
    (Publication id: 000061830)
  • RNA editing by ADAR1 leads to context-dependent transcriptome-wide changes in RNA secondary structure

    Oz Solomon; Ayelet Di Segni; Karen Cesarkas; Hagit T. Porath; Victoria Marcu-Malina; Orel Mizrahi; Noam Stern-Ginossar; Nitzan Kol; Sarit Farage-Barhom; Efrat Glick-Saar; Yaniv Lerenthal; Erez Y. Levanon; Ninette Amariglio; Ron Unger; Itamar Goldstein; Eran Eyal; Gidi Rechavi (2017)
    (Publication id: 87f367d4-b344-4f46-9aa2-bf6c09fde46a)
  • The m(1)A landscape on cytosolic and mitochondrial mRNA at single-base resolution

    Modi Safra; Aldema Sas-Chen; Roni Nir; Roni Winkler; Aharon Nachshon; Dan Bar-Yaacov; Matthias Erlacher; Walter Rossmanith; Noam Stern-Ginossar; Schraga Schwartz (2017)
    (Publication id: 5006451c-f847-4b72-9fd8-0dc70edaeb9b)
  • NFIL-trating the Host Circadian Rhythm-Microbes Fine-Tune the Epithelial Clock

    Christoph A. Thaiss; Samuel P. Nobs; Eran Elinav (2017)
    (Publication id: 69b20911-4ecc-4332-9a55-d8f8a877d522)
  • Citrobacter rodentium Subverts ATP Flux and Cholesterol Homeostasis in Intestinal Epithelial Cells In Vivo

    Cedric N. Berger; Valerie F. Crepin; Theodoros I. Roumeliotis; James C. Wright; Danielle Carson; Meirav Pevsner-Fischer; R. Christopher D. Furniss; Gordon Dougan; Mally Dori-Bachash; Lu Yu; Abigail Clements; James W. Collins; Eran Elinav; Gerald J. Larrouy-Maumus; Jyoti S. Choudhary; Gad Frankel (2017)
    (Publication id: 390103cc-d7f0-4d5b-b374-d36b9726ed9b)
  • The human lncRNA LINC-PINT inhibits tumor cell invasion through a highly conserved sequence element

    Oskar Marin-Bejar; Aina M. Mas; Jovanna Gonzalez; Dannys Martinez; Alejandro Athie; Xabier Morales; Mikel Galduroz; Ivan Raimondi; Elena Grossi; Shuling Guo; Ana Rouzaut; Igor Ulitsky; Maite Huarte (2017)
    (Publication id: 000061896)
  • Multiscale 3D Genome Rewiring during Mouse Neural Development

    Boyan Bonev; Netta Mendelson Cohen; Quentin Szabo; Lauriane Fritsch; Giorgio L. Papadopoulos; Yaniv Lubling; Xiaole Xu; Xiaodan Lv; Jean-Philippe Hugnot; Amos Tanay; Giacomo Cavalli (2017)
    (Publication id: 000061919)
  • OCT4 impedes cell fate redirection by the melanocyte lineage master regulator MITF in mouse ESCs

    Danna Sheinboim; Itay Maza; Iris Dror; Shivang Parikh; Vladislav Krupalnik; Rachel E. Bell; Asaf Zviran; Yusuke Suita; Ofir Hakim; Yael Mandel-Gutfreund; Mehdi Khaled; Jacob H. Hanna; Carmit Levy (2017)
    (Publication id: 000061920)
  • Ectopic colonization of oral bacteria in the intestine drives T(H)1 cell induction and inflammation

    Koji Atarashi; Wataru Suda; Chengwei Luo; Takaaki Kawaguchi; Iori Motoo; Seiko Narushima; Yuya Kiguchi; Keiko Yasuma; Eiichiro Watanabe; Takeshi Tanoue; Christoph A. Thaiss; Mayuko Sato; Kiminori Toyooka; Heba S. Said; Hirokazu Yamagami; Scott A. Rice; Dirk Gevers; Ryan C. Johnson; Julia A. Segre; Kong Chen; Jay K. Kolls; Eran Elinav; Hidetoshi Morita; Ramnik J. Xavier; Masahira Hattori; Kenya Honda (2017)
    (Publication id: 1b048b0f-4812-41b2-a4ea-2322ea91ddcf)
  • scDual-Seq: mapping the gene regulatory program of Salmonella infection by host and pathogen single-cell RNA-sequencing: mapping the gene regulatory program of Salmonella infection by host and pathogen single-cell RNA-sequencing

    Gal Avital; Roi Avraham; Amy Fan; Tamar Hashimshony; Deborah T. Hung; Itai Yanai (2017)
    (Publication id: 000061898)
  • Engineering carbon fixation in E. coil: from heterologous RuBisCO expression to the Calvin-Benson-Bassham cycle: from heterologous RuBisCO expression to the Calvin-Benson-Bassham cycle

    Niv Antonovsky; Shmuel Gleizer; Ron Milo (2017)
    (Publication id: 000061941)
  • Prediction of drug cocktail effects when the number of measurements is limited

    Anat Zimmer; Avichai Tendler; Itay Katzir; Avi Mayo; Uri Alon (2017)
    (Publication id: 000061942)
  • hSnd2 protein represents an alternative targeting factor to the endoplasmic reticulum in human cells

    Sarah Hassdenteufel; Mark Sicking; Stefan Schorr; Naama Aviram; Claudia Fecher-Trost; Maya Schuldiner; Martin Jung; Richard Zimmermann; Sven Lang (2017)
    (Publication id: 000061944)
  • The microbiome in anti-cancer therapy

    Stavros Bashiardes; Timur Tuganbaev; Sara Federici; Eran Elinav (2017)
    (Publication id: 68de680c-e670-43f1-8db4-a59373b0a5c2)
  • Buffering Global Variability of Morphogen Gradients

    Ben-Zion Shilo; Naama Barkai (2017)
    (Publication id: 000050440)
  • Single-cell transcriptome conservation in cryopreserved cells and tissues

    Amy Guillaumet-Adkins; Gustavo Rodriguez-Esteban; Elisabetta Mereu; Maria Mendez-Lago; Diego A. Jaitin; Alberto Villanueva; August Vidal; Alex Martinez-Marti; Enriqueta Felip; Ana Vivancos; Hadas Keren-Shaul; Simon Heath; Marta Gut; Ido Amit; Ivo Gut; Holger Heyn (2017)
    (Publication id: 84ab2ac0-e3b5-4895-8b86-bdb18aa767bb)
  • Model-based analysis of DNA replication profiles: predicting replication fork velocity and initiation rate by profiling free-cycling cells

    Ariel Gispan; Miri Carmi; Naama Barkai (2017)
    (Publication id: 000050504)
  • Lighting Up ERK Activity

    Ben-Zion Shilo; Naama Barkai (2017)
    (Publication id: bfef78d7-2192-4b1c-aa7b-1bdb02ff06c8)
  • Early commitment and robust differentiation in colonic crypts

    Beata Toth; Shani Ben-Moshe; Avishai Gavish; Naama Barkai; Shalev Itzkovitz (2017)
    (Publication id: 000050548)
  • An Endogenously Tagged Fluorescent Fusion Protein Library in Mouse Embryonic Stem Cells

    Arigela Harikumar; Raghu Ram Edupuganti; Matan Sorek; Gajendra Kumar Azad; Styliani Markoulaki; Petra Sehnalova; Sona Legartova; Eva Bartova; Shlomit Farkash-Amar; Rudolf Jaenisch; Uri Alon; Eran Meshorer (2017)
    (Publication id: 000061937)
  • A reduced-dimensionality approach to uncovering dyadic modes of body motion in conversations

    Guy Gaziv; Lior Noy; Yuvalal Liron; Uri Alon (2017)
    (Publication id: 000050522)
  • Optimal Regulatory Circuit Topologies for Fold-Change Detection

    Miri Adler; Pablo Szekely; Avi Mayo; Uri Alon (2017)
    (Publication id: 000050469)
  • Role of biomechanical forces in hyperfiltration-mediated glomerular injury in congenital anomalies of the kidney and urinary tract

    Tarak Srivastava; Ganesh Thiagarajan; Uri S. Alon; Ram Sharma; Ashraf El-Meanawy; Ellen T. McCarthy; Virginia J. Savin; Mukut Sharma (2017)
    (Publication id: cf941ee2-e5f1-4ae5-877f-de4a24e1f870)
  • Cinacalcet as an alternative to phosphate therapy in X-linked hypophosphataemic rickets

    Uri S. Alon; Dale Jarka; Penny J. Monachino; Judith Sebestyen VanSickle; Tarak Srivastava (2017)
    (Publication id: f92930ac-da8a-4975-ae2e-8200f8dbd7d9)
  • Single-cell spatial reconstruction reveals global division of labour in the mammalian liver

    Keren Bahar Halpern; Rom Shenhav; Orit Matcovitch-Natan; Beata Toth; Doron Lemze; Matan Golan; Efi E. Massasa; Shaked Baydatch; Shanie Landen; Andreas E. Moor; Alexander Brandis; Amir Giladi; Avigail Stokar-Avihail; Eyal David; Ido Amit; Shalev Itzkovitz (2017)
    (Publication id: 000050477)
  • Analysis of blood-based gene expression in idiopathic Parkinson disease

    Ron Shamir; Christine Klein; David Amar; Eva-Juliane Vollstedt; Michael Bonin; Marija Usenovic; Yvette C. Wong; Ales Maver; Sven Poths; Hershel Safer; Jean-Christophe Corvol; Suzanne Lesage; Ofer Lavi; Guenther Deuschl; Gregor Kuhlenbaeumer; Heike Pawlack; Igor Ulitsky; Meike Kasten; Olaf Riess; Alexis Brice; Borut Peterlin; Dimitri Krainc (2017)
    (Publication id: a595f09a-010d-4122-b494-1fb6239e6394)
  • Coordinated Pulses of mRNA and of Protein Translation or Degradation Produce EGF-Induced Protein Bursts

    Roni Golan-Lavi; Chiara Giacomelli; Garold Fuks; Amit Zeisel; Johanna Sonntag; Sanchari Sinha; Wolfgang Kostler; Stefan Wiemann; Ulrike Korf; Yosef Yarden; Eytan Domany (2017)
    (Publication id: 85617a82-82e1-40e4-aa61-ef099ec03908)
  • The genetic basis for the adaptation of E-coli to sugar synthesis from CO2

    Elad Herz; Niv Antonovsky; Yinon Bar-On; Dan Davidi; Shmuel Gleizer; Noam Prywes; Lianet Noda-Garcia; Keren Lyn Frisch; Yehudit Zohar; David G. Wernick; Alon Savidor; Uri Barenholz; Ron Milo (2017)
    (Publication id: c8cd0f36-3bcc-4a26-b320-72dfae6ccab5)
  • Proteins evolve on the edge of supramolecular self-assembly

    Hector Garcia-Seisdedos; Charly Empereur-Mot; Nadav Elad; Emmanuel D. Levy (2017)
    (Publication id: dc187e9d-0647-427f-aff3-57fcca19068d)
  • Gene Architectures that Minimize Cost of Gene Expression

    Idan Frumkin; Dvir Schirman; Aviv Rotman; Fangfei Li; Liron Zahavi; Ernest Mordret; Omer Asraf; Song Wu; Sasha F. Levy; Yitzhak Pilpel (2017)
    (Publication id: 000050530)
  • p53 is essential for DNA methylation homeostasis in naive embryonic stem cells, and its loss promotes clonal heterogeneity

    Ayala Tovy; Adam Spiro; Ryan McCarthy; Zohar Shipony; Yael Aylon; Kendra Allton; Elena Ainbinder; Noa Furth; Amos Tanay; Michelle Barton; Moshe Oren (2017)
    (Publication id: 296a1b6a-f824-4ddc-82b9-72408c5961e8)
  • TRUB1 is the predominant pseudouridine synthase acting on mammalian mRNA via a predictable and conserved code

    Modi Safra; Ronit Nir; Daneyal Farouq; Ilya Vainberg Slutzkin; Schraga Schwartz (2017)
    (Publication id: 000050453)
  • Systematic Investigation of Transcription Factor Activity in the Context of Chromatin Using Massively Parallel Binding and Expression Assays

    Michal Levo; Tali Avnit-Sagi; Maya Lotan-Pompan; Yael Kalma; Adina Weinberger; Zohar Yakhini; Eran Segal (2017)
    (Publication id: 000050476)
  • Scaling single-cell genomics from phenomenology to mechanism

    Amos Tanay; Aviv Regev (2017)
    (Publication id: 000050525)
  • Relevance of iPSC-derived human PGC-like cells at the surface of embryoid bodies to prechemotaxis migrating PGCs

    Shino Mitsunaga; Junko Odajima; Shiomi Yawata; Keiko Shioda; Chie Owa; Kurt J. Isselbacher; Toshi Shioda; Jacob (Yaqub) Hanna (2017)
    (Publication id: fcb58454-3508-4c93-b32a-9dff8ed34689)
  • Increased NK cell immunity in a transgenic mouse model of NKp46 overexpression

    Ariella Glasner; Batya Isaacson; Sergey Viukov; Tzahi Neuman; Nehemya Friedman; Michal Mandelboim; Veronika Sexl; Jacob H. Hanna; Ofer Mandelboim (2017)
    (Publication id: 000061930)
  • m(6)A mRNA modifications are deposited in nascent pre-mRNA and are not required for splicing but do specify cytoplasmic turnover

    Shengdong Ke; Amy Pandya-Jones; Yuhki Saito; John J. Fak; Cathrine Broberg Vagbo; Shay Geula; Jacob H. Hanna; Douglas L. Black; James E. Darnell; Robert B. Darnell (2017)
    (Publication id: 376631b5-9df3-4834-bdd4-7d508bcfff1a)
  • Design principles of autocatalytic cycles constrain enzyme kinetics and force low substrate saturation at flux branch points

    Uri Barenholz; Dan Davidi; Ed Reznik; Yinon Bar-On; Niv Antonovsky; Elad Noor; Ron Milo (2017)
    (Publication id: 000050485)
  • RNA editing in bacteria recodes multiple proteins and regulates an evolutionarily conserved toxin-antitoxin system

    Dan Bar-Yaacov; Ernest Mordret; Ruth Towers; Tammy Biniashvili; Clara Soyris; Schraga Schwartz; Orna Dahan; Yitzhak Pilpel (2017)
    (Publication id: 0ebda791-534c-4502-80c2-0a68ce7644b6)
  • A different kind of love - lipid droplet contact sites

    Maya Schuldiner; Maria Bohnert (2017)
    (Publication id: 6a564484-b4c4-4f23-95bd-94b346d5a762)
  • Mitochatting - If only we could be a fly on the cell wall

    Michal Eisenberg-Bord; Maya Schuldiner (2017)
    (Publication id: 975b9fb0-db33-4e58-bb65-e5debc20d73a)
  • Regulation of antibiotic-resistance by non-coding RNAs in bacteria

    Daniel Dar; Rotem Sorek (2017)
    (Publication id: 94c33721-e3dc-4953-9002-d9e131d0f160)
  • APOL1-Mediated Cell Injury Involves Disruption of Conserved Trafficking Processes

    Etty Kruzel-Davila; Revital Shemer; Ayala Ofir; Ira Bavli-Kertselli; Ilona Darlyuk-Saadon; Pazit Oren-Giladi; Walter G. Wasser; Daniella Magen; Eid Zaknoun; Maya Schuldiner; Adi Salzberg; Daniel Kornitzer; Zvonimir Marelja; Matias Simons; Karl Skorecki (2017)
    (Publication id: eb409659-7d5b-4042-9bb6-d913ceb6fded)
  • Communication between viruses guides lysis-lysogeny decisions

    Zohar Erez; Ida Steinberger-Levy; Maya Shamir; Shany Doron; Avihail, Avigail Stokar Avihail; Yoav Peleg; Sarah Melamed; Azita Leavitt; Alon Savidor; Shira Albeck; Gil Amitai; Rotem Sorek (2017)
    (Publication id: 000050523)
  • Vesicles Spread Susceptibility to Phages

    Gal Ofir; Rotem Sorek (2017)
    (Publication id: 000050527)
  • Computational prediction of regulatory, premature transcription termination in bacteria

    Adi Millman; Daniel Dar; Maya Shamir; Rotem Sorek (2017)
    (Publication id: 000050534)
  • The Role of the Immune System in Metabolic Health and Disease

    Niv Zmora; Stavros Bashiardes; Maayan Levy; Eran Elinav (2017)
    (Publication id: 000050446)
  • Spatial reconstruction of immune niches by combining photoactivatable reporters and scRNA-seq

    Chiara Medaglia; Amir Giladi; Liat Stoler-Barak; Marco De Giovanni; Tomer Meir Salame; Adi Biram; Eyal David; Hanjie Li; Matteo Iannacone; Ziv Shulman; Ido Amit (2017)
    (Publication id: a4390518-a8f3-45ea-9591-ad2de579d27b)
  • Microbiome at the Frontier of Personalized Medicine

    Purna C. Kashyap; Nicholas Chia; Heidi Nelson; Eran Segal; Eran Elinav (2017)
    (Publication id: e26b6412-3979-49d1-9350-a0a694a1446a)
  • Our Gut Microbiome: The Evolving Inner Self

    Parag Kundu; Eran Blacher; Eran Elinav; Sven Pettersson (2017)
    (Publication id: ecb2a239-74a2-4cc5-807d-ab62b88f3f05)
  • Suppressors and activators of JAK-STAT signaling at diagnosis and relapse of acute lymphoblastic leukemia in Down syndrome

    Omer Schwartzman; Angela Maria Savino; Michael Gombert; Chiara Palmi; Gunnar Cario; Martin Schrappe; Cornelia Eckert; Arend von Stackelberg; Jin-Yan Huang; Michal Hameiri-Grossman; Smadar Avigad; Geertruy te Kronnie; Ifat Geron; Yehudit Birger; Avigail Rein; Giulia Zarfati; Ute Fischer; Zohar Mukamel; Martin Stanulla; Andrea Biondi; Giovanni Cazzaniga; Amedeo Vetere; Bridget K. Wagner; Zhu Chen; Sai-Juan Chen; Amos Tanay; Arndt Borkhardt; Shai Izraeli (2017)
    (Publication id: 000055214)
  • Pex35 is a regulator of peroxisome abundance

    Ido Yofe; Kareem Soliman; Silvia G. Chuartzman; Bruce Morgan; Uri Weill; Eden Yifrach; Tobias P. Dick; Sara J. Cooper; Christer S. Ejsing; Maya Schuldiner; Einat Zalckvar; Sven Thoms (2017)
    (Publication id: 000050478)
  • Incredibly close-A newly identified peroxisome-ER contact site in humans

    Maya Schuldiner; Einat Zalckvar (2017)
    (Publication id: 000050506)
  • Systemic Human ILC Precursors Provide a Substrate for Tissue ILC Differentiation

    Ai Ing Lim; Yan Li; Silvia Lopez-Lastra; Ralph Stadhouders; Franziska Paul; Armanda Casrouge; Nicolas Serafini; Anne Puel; Jacinta Bustamante; Laura Surace; Guillemette Masse-Ranson; Eyal David; Helene Strick-Marchand; Bourhis, Lionel Le Bourhis; Roberto Cocchi; Davide Topazio; Paolo Graziano; Lucia Anna Muscarella; Lars Rogge; Xavier Norel; Jean-Michel Sallenave; Matthieu Allez; Thomas Graf; Rudi W. Hendriks; Jean-Laurent Casanova; Ido Amit; Hans Yssel; Santo, James P. Di Santo (2017)
    (Publication id: 000050443)
  • Principles of Systems Biology, No. 14

    Zohar Erez; Rotem Sorek; Sichen Shao; Ramanujan S. Hegde; Devin K. Schweppe; Juan D. Chavez; James E. Bruce; Eshchar Mizrachi; Lieven Verbeke; Peer, Yves Van de Peer; Kathleen Marchal; Alexander A. Myburg; Jonathan A. Bennett; John Klironomos; Gregory F. Payne; William E. Bentley; Ronan Fleming; Ines Thiele; Joseph K. Cheng; Hal S. Alper; John Rose; Dustin Maly; Dan Piraner; Mohamad Abedi; Mikhail Shapiro; Zhenling Cui; Sergey Mureev; Kirill Alexandrov (2017)
    (Publication id: 000050467)
  • Casein kinase 1-epsilonor1-delta required for Wnt-mediated intestinal stem cell maintenance

    Yael Morgenstern; Adhikari, Upasana Das Adhikari; Muneef Ayyash; Ela Elyada; Beata Toth; Andreas Moor; Shalev Itzkovitz; Yinon Ben-Neriah (2017)
    (Publication id: 000061924)
  • DEFINING VIRAL INFECTION STATES OF A BLOOM-FORMING MARINE ALGA WITH SINGLE-CELL DUAL RNA SEQUENCING

    C. Ku; Uri Sheyn; Pedros, Arnau Sebe Pedros; Amos Tanay; Shilo Rosenwasser; Ayelet Vardi (2017)
    (Publication id: 000061962)
  • AML1-ETO requires enhanced C/D box snoRNA/RNP formation to induce self-renewal and leukaemia

    Fengbiao Zhou; Yi Liu; Christian Rohde; Cornelius Pauli; Dennis Gerloff; Marcel Koehn; Danny Misiak; Nicole Baeumer; Chunhong Cui; Stefanie Goellner; Thomas Oellerich; Hubert Serve; Maria-Paz Garcia-Cuellar; Robert Slany; Jaroslaw P. Maciejewski; Bartlomiej Przychodzen; Barbara Seliger; Hans-Ulrich Klein; Christoph Bartenhagen; Wolfgang E. Berdel; Martin Dugas; Makoto Mark Taketo; Daneyal Farouq; Schraga Schwartz; Aviv Regev; Josee Hebert; Guy Sauvageau; Caroline Pabst; Stefan Huettelmaier; Carsten Mueller-Tidow (2017)
    (Publication id: cfebeafb-c58a-4caf-acc2-47d9fa4c560c)
  • Next-generation sequencing technologies for detection of modified nucleotides in RNAs

    Schraga Schwartz; Yuri Motorin (2017)
    (Publication id: fafa9705-099c-4766-ae59-e548f365dff7)
  • Methods for distinguishing between protein-coding and long noncoding RNAs and the elusive biological purpose of translation of long noncoding RNAs

    Gali Housman; Igor Ulitsky (2016)
    (Publication id: 000047475)
  • The role of the local environment and epigenetics in shaping macrophage identity and their effect on tissue homeostasis

    Ido Amit; Deborah R. Winter; Steffen Jung (2016)
    (Publication id: 000048099)
  • Circular RNAs are long-lived and display only minimal early alterations in response to a growth factor

    Yehoshua Enuka; Mattia Lauriola; Aldema Sas-Chen; Igor Ulitsky; Yosef Yarden (2016)
    (Publication id: 000048136)
  • The Cost of Protein Production.

    Moshe Kafri; Eyal Metzl-Raz; Ghil Jona; Naama Barkai (2016)
    (Publication id: 000048175)
  • CRISPR-Cas adaptation: insights into the mechanism of action.

    Gil Amitai; Rotem Sorek (2016)
    (Publication id: 000048207)
  • Cracking the epitranscriptome.

    Schraga Schwartz (2016)
    (Publication id: 000048208)
  • The Protease Ste24 Clears Clogged Translocons.

    Tslil Ast; Susan Michaelis; Maya Schuldiner (2016)
    (Publication id: 000048209)
  • Taking it Personally: Personalized Utilization of the Human Microbiome in Health and Disease.

    Niv Zmora; David Zeevi; Tal Korem; Eran Segal; Eran Elinav (2016)
    (Publication id: 000048212)
  • Sumoylation coordinates the repression of inflammatory and anti-viral gene-expression programs during innate sensing

    Adrien Decque; Olivier Joffre; Joao G. Magalhaes; Jack-Christophe Cossec; Ronnie Blecher-Gonen; Pierre Lapaquette; Aymeric Silvin'; Nicolas Mane; Pierre -Emmanuel Joubert; Jacob-Sebastian Seeler; Matthew L. Albert; Ido Amit; Sebastian Amigorena; Anne Dejean (2016)
    (Publication id: 000048240)
  • Systematic discovery of cap-independent translation sequences in human and viral genomes

    Shira Weingarten-Gabbay; Shani Elias-Kirma; Ronit Nir; Alexey A. Gritsenko; Noam Stern-Ginossar; Zohar Yakhini; Adina Weinberger; Eran Segal (2016)
    (Publication id: 000048246)
  • Integration of Innate Immune Signaling.

    Christoph Alexander Thaiss; Maayan Levy; Shlomik Itav; Eran Elinav (2016)
    (Publication id: 000048280)
  • Are We Really Vastly Outnumbered? Revisiting the Ratio of Bacterial to Host Cells in Humans.

    Ron Sender; Shai Fuchs; Ron Milo (2016)
    (Publication id: 000048282)
  • Natural Diversity in Pentose Fermentation Is Explained by Variations in Histone Deacetylases.

    Zvi Tamari; Naama Barkai (2016)
    (Publication id: 000048285)
  • Evolutionary analysis across mammals reveals distinct classes of long non-coding RNAs

    Jenny Chen; Alexander A. Shishkin; Xiaopeng Zhu; Sabah Kadri; Itay Maza; Mitchell Guttman; Jacob H. Hanna; Aviv Regev; Manuel Garber (2016)
    (Publication id: 000048313)
  • PD-1 immune checkpoint blockade reduces pathology and improves memory in mouse models of Alzheimer's disease

    Kuti Baruch; Aleksandra Deczkowska; Neta Rosenzweig; Afroditi Tsitsou-Kampeli; Alaa Mohammad Sharif; Orit Matcovitch-Natan; Alexander Kertser; Eyal David; Ido Amit; Michal Schwartz (2016)
    (Publication id: 000048317)
  • 3 ' UTR Shortening Potentiates MicroRNA-Based Repression of Pro-differentiation Genes in Proliferating Human Cells

    [Unknown] Hoffman; Debora Rosa Bublik; Alejandro P Ugalde; Ran Elkon; Tammy Biniashvili; Reuven Agami; Moshe Oren; Yitzhak Pilpel (2016)
    (Publication id: 000048472)
  • Synthesis And Cell-Free Cloning Of Dna Libraries Using Programmable Microfluidics

    Tuval Ben-Yehezkel; Arnaud Rival; Ofir Raz; Rafael Cohen; Zipora Marx; Miguel Camara; Jean-Frederic Dubern; Birgit Koch; Stephan Heeb; Natalio Krasnogor; Cyril Delattre; Ehud Shapiro (2016)
    (Publication id: 000048477)
  • Expression homeostasis during DNA replication

    Yoav Voichek; Raz Bar-Ziv; Naama Barkai (2016)
    (Publication id: 000048491)
  • Bursting Through The Cell Cycle

    Moshe, Shani Ben Moshe; Shalev Itzkovitz (2016)
    (Publication id: 000048526)
  • Periodic Patterning Of The Drosophila Eye Is Stabilized By The Diffusible Activator Scabrous

    Avishai Gavish; Arkadi Shwartz; Abraham Weizman; Eyal Schejter; Ben-Zion Shilo; Naama Barkai (2016)
    (Publication id: 000048549)
  • No peroxisome is an island - Peroxisome contact sites.

    Nadav Shai; Maya Schuldiner; Einat Zalckvar (2016)
    (Publication id: 000048574)
  • Talking about cross-talk: the immune system and the microbiome.

    David Zeevi; Tal Korem; Eran Segal (2016)
    (Publication id: 000048581)
  • SnapShot: Timescales in Cell Biology

    Maya Shamir; Ron Milo; Yinon Bar-On (2016)
    (Publication id: 000048605)
  • Global characterization of in vivo enzyme catalytic rates and their correspondence to in vitro kcat measurements

    Dan Davidi; Uri Barenholz; Miki Goldenfeld; Ron Milo (2016)
    (Publication id: 000048606)
  • Voices Of Biotech

    Ido Amit; David Baker; Roger Barker; Bonnie Berger; Carolyn Bertozzi; Sangeeta Bhatia; Alessandra Biffi; Francesca Demichelis; Jennifer Doudna; Steven F. Dowdy; Drew Endy; Moritz Helmstaedter; Howard Junca; Carl June; Sasha Kamb; Anastasia Khvorova; Dae-Hyeong Kim; Jin-Soo Kim; Yamuna Krishnan; Melike Lakadamyali; Tuuli Lappalainen; Sharon Lewin; James Liao; Nick Loman; Emma Lundberg; Lee Lynd; Cathie Martin; Ira Mellman; Atsushi Miyawaki; Christine Mummery; Karen Nelson; Jeanne Paz; Pamela Peralta-Yahya; Paola Picotti; Kornelia Polyak; Kristala Prather; Jun Qin; Stephen Quake; Aviv Regev; John A. Rogers; Reshma Shetty; Morten Sommer; Molly Stevens; Gustavo Stolovitzky; Masayo Takahashi; Fuchou Tang; Sarah Teichmann; Maria-Elena Torres-Padilla; Leena Tripathi; Praveen Vemula; Greg Verdine; Frank Vollmer; Jun Wang; Jackie Y. Ying; Feng Zhang; Tian Zhang (2016)
    (Publication id: 000048536)
  • Dynamic stem cell states: naive to primed pluripotency in rodents and humans

    Leehee Weinberger; Muneef Ayyash; Noa Novershtern; JH Hanna (2016)
    (Publication id: 000048643)
  • A WntD-Dependent Integral Feedback Loop Attenuates Variability in Drosophila Toll Signaling

    Neta Rahimi; Inna Averbukh; Ittah, Michal Haskel Ittah; Neta Degani; ED Schejter; Naama Barkai; BZ Shilo (2016)
    (Publication id: 000048645)
  • Single molecule approaches for quantifying transcription and degradation rates in intact mammalian tissues.

    Halpern, Keren Bahar Halpern; Shalev Itzkovitz (2016)
    (Publication id: 000048668)
  • One library to make them all: streamlining the creation of yeast libraries via a SWAp-Tag strategy.

    Ido Yofe; Uri Weill; Matthias Meurer; Silvia Chuartzman; Einat Zalckvar; Omer Goldman; Shifra Ben-Dor; Conny Schutze; Nils Wiedemann; Michael Knop; Anton Khmelinskii; Maya Schuldiner (2016)
    (Publication id: 000048669)
  • A Minimalistic Resource Allocation Model to Explain Ubiquitous Increase in Protein Expression with Growth Rate

    Uri Barenholz; Leeat Keren; Eran Segal; Ron Milo (2016)
    (Publication id: 000048702)
  • Role of the microbiome in non-gastrointestinal cancers.

    Meirav Pevsner-Fischer; Timur Tuganbaev; Mariska Meijer; Sheng-Hong Zhang; Zhi-Rong Zeng; Min-Hu Chen; Eran Elinav (2016)
    (Publication id: 000048696)
  • Transcript degradation and noise of small RNA-controlled genes in a switch activated network in Escherichia coli.

    Rinat Arbel-Goren; Asaf Tal; Bibudha Parasar; Alvah Dym; Nina Costantino; Javier Munoz-Garcia; Donald L Court; Joel Stavans (2016)
    (Publication id: 000048824)
  • eSTGt: a programming and simulation environment for population dynamics

    Adam Spiro; Ehud Shapiro (2016)
    (Publication id: 000048843)
  • Glucose becomes one of the worst carbon sources for E-coli on poor nitrogen sources due to suboptimal levels of cAMP

    Anat Bren; Junyoung O. Park; Benjamin D. Towbin; Erez Dekel; Joshua D. Rabinowitz; Uri Alon (2016)
    (Publication id: 000048855)
  • Parkinson disease (PARK) genes are somatically mutated in cutaneous melanoma.

    Rivka Inzelberg; Yardena Samuels; Esther Azizi; Nouar Qutob; Lilah Inzelberg; Eytan Domany; Edna Schechtman; Eitan Friedman (2016)
    (Publication id: 000048879)
  • Term-seq reveals abundant ribo-regulation of antibiotics resistance in bacteria

    Daniel Dar; Maya Shamir; J. R. Mellin; Mikael Koutero; Noam Stern-Ginossar; Pascale Cossart; Rotem Sorek (2016)
    (Publication id: 000048858)
  • Use of Metatranscriptomics in Microbiome Research.

    Stavros Bashiardes; Gili Zilberman-Schapira; Eran Elinav (2016)
    (Publication id: 000048884)
  • Biological causal links on physiological and evolutionary time scales.

    Amit Karmon; Yitzhak Pilpel (2016)
    (Publication id: 000048885)
  • Transcriptome dynamics of a broad host-range cyanophage and its hosts

    Shany Doron; Ayalla Fedida; Miguel A. Hernandez-Prieto; Gazalah Sabehi; Iris Karunker; Damir Stazic; Roi Feingersch; Claudia Steglich; Matthias Futschik; Debbie Lindell; Rotem Sorek (2016)
    (Publication id: 000048889)
  • Pyruvate Formate-Lyase Enables Efficient Growth of Escherichia coli on Acetate and Formate

    Lior Zelcbuch; Steffen N. Lindner; Yonatan Zegman; Ilya Vainberg Slutskin; Niv Antonovsky; Shmuel Gleizer; Ron Milo; Arren Bar-Even (2016)
    (Publication id: 000048908)
  • The mutation spectrum in genomic late replication domains shapes mammalian GC content

    Ephraim Kenigsberg; Yishai Yehuda; Lisette Marjavaara; Andrea Keszthelyi; Andrei Chabes; Amos Tanay; Itamar Simon (2016)
    (Publication id: 000048969)
  • Sugar Synthesis from CO2 in Escherichia coli

    Niv Antonovsky; Shmuel Gleizer; Elad Noor; Yehudit Zohar; Elad Herz; Uri Barenholz; Lior Zelcbuch; Shira Amram; Aryeh Wides; Naama Tepper; Dan Davidi; Yinon Bar-On; Tasneem Bareia; David G. Wernick; Ido Shani; Sergey Malitsky; Ghil Jona; Arren Bar-Even; Ron Milo (2016)
    (Publication id: 000049163)
  • M-sec regulates polarized secretion of inflammatory endothelial chemokines and facilitates CCL2-mediated lymphocyte transendothelial migration

    Sagi Barzilai; Ronnie Blecher-Gonen; Itzhaki, Zohar Barnett Itzhaki; Ayelet Zauberman; Yaeli Lebel-Haziv; Ido Amit; Ronen Alon (2016)
    (Publication id: 000049228)
  • The microbiome and innate immunity

    Christoph Alexander Thaiss; Niv Zmora; Maayan Levy; Eran Elinav (2016)
    (Publication id: 000049234)
  • Evolution of domain-peptide interactions to coadapt specificity and affinity to functional diversity

    Abdellali Kelil; Emmanuel Doram Levy; Stephen W. Michnick (2016)
    (Publication id: 000049235)
  • The Genetic Program of Pancreatic beta-Cell Replication In Vivo

    Agnes Klochendler; Inbal Caspi; Noa Corem; Maya Moran; Oriel Friedlich; Sharona Elgavish; Yuval Nevo; Aharon Helman; Benjamin Glaser; Amir Eden; Shalev Itzkovitz; Yuval Dor (2016)
    (Publication id: 000049240)
  • Manipulating the Placebo Response in Experimental Pain by Altering Doctor's Performance Style

    Efrat Czerniak; Anat Biegon; Amitai Ziv; Orit Karnieli-Miller; Mark Weiser; Uri Alon; Atay Citron (2016)
    (Publication id: 000049242)
  • Microglia development follows a stepwise program to regulate brain homeostasis.

    Orit Matcovitch-Natan; Deborah R Winter; Amir Giladi; Aguilar, Stephanie Vargas Aguilar; Amit Spinrad; Sandrine Sarrazin; Hila Ben-Yehuda; Eyal David; Gonzalez, Fabiola Zelada Gonzalez; Pierre Perrin; Hadas Keren-Shaul; Meital Gury; David Lara-Astaiso; Christoph Alexander Thaiss; Merav Cohen; Halpern, Keren Bahar Halpern; Kuti Baruch; Aleksandra Deczkowska; Vivas, Erika Lorenzo Vivas; Shalev Itzkovitz; Eran Elinav; Michael H Sieweke; Michal Schwartz; Ido Amit (2016)
    (Publication id: 000049293)
  • Revised Estimates for the Number of Human and Bacteria Cells in the Body.

    Ron Sender; Shai Fuchs; Ron Milo (2016)
    (Publication id: 000049299)
  • A highly multiplexed and sensitive RNA-seq protocol for simultaneous analysis of host and pathogen transcriptomes.

    Roi Avraham; Nathan Haseley; Amy Fan; Zohar Bloom-Ackermann; Jonathan Livny; Deborah T Hung (2016)
    (Publication id: 000049285)
  • A conserved abundant cytoplasmic long noncoding RNA modulates repression by Pumilio proteins in human cells.

    Ailone Tichon; Noa Gil; Yoav Lubelsky; Solomon, Tal Havkin Solomon; Doron Lemze; Shalev Itzkovitz; Noam Stern-Ginossar; Igor Ulitsky (2016)
    (Publication id: 000049311)
  • Automated Video Analysis of Non-verbal Communication in a Medical Setting

    Yuval Hart; Efrat Czerniak; Orit Karnieli-Miller; Avraham E. Mayo; Amitai Ziv; Anat Biegon; Atay Citron; Uri Alon (2016)
    (Publication id: 000049386)
  • Post-translational modification profiling - A novel tool for mapping the protein modification landscape in cancer

    Avital Eisenberg-Lerner; Aaron Ciechanover; Yifat Merbl (2016)
    (Publication id: 000049394)
  • Metabolites: messengers between the microbiota and the immune system

    Maayan Levy; Christoph Alexander Thaiss; Eran Elinav (2016)
    (Publication id: 000049407)
  • Chromatin dynamics during DNA replication.

    Raz Bar-Ziv; Yoav Voichek; Naama Barkai (2016)
    (Publication id: 000049464)
  • The Spectrum and Regulatory Landscape of Intestinal Innate Lymphoid Cells Are Shaped by the Microbiome.

    Meital Gury-BenAri; Christoph Alexander Thaiss; Nicolas Serafini; Deborah R Winter; Amir Giladi; Astiaso, David Lara Astiaso; Maayan Levy; Tomer Meir Salame; Assaf Weiner; Eyal David; Hagit Shapiro; Mally Dori-Bachash; Meirav Pevsner-Fischer; Vivas, Erika Lorenzo Vivas; Hadas Keren-Shaul; Franziska Paul; Alon Harmelin; Gerard Eberl; Shalev Itzkovitz; Amos Tanay; Santo, James P Di Santo; Eran Elinav; Ido Amit (2016)
    (Publication id: 000049469)
  • Massively Parallel Interrogation of the Effects of Gene Expression Levels on Fitness.

    Leeat Keren; Jean Hausser; Maya Lotan-Pompan; Slutskin, Ilya Vainberg Slutskin; Hadas Alisar; Sivan Kaminski; Adina Weinberger; Uri Alon; Ron Milo; Eran Segal (2016)
    (Publication id: 000049470)
  • Environmentally Optimal, Nutritionally Aware Beef Replacement Plant-Based Diets.

    Gidon Eshel; Alon Shepon; Elad Noor; Ron Milo (2016)
    (Publication id: 000049472)
  • LIMT is a novel metastasis inhibiting lncRNA suppressed by EGF and downregulated in aggressive breast cancer.

    Aldema Sas-Chen; Miriam R Aure; Limor Leibovich; Silvia Carvalho; Yehoshua Enuka; Cindy Korner; Maria Polycarpou-Schwarz; Sara Lavi; Nava Nevo; Yuri Kuznetsov; Justin Yuan; Francisco Azuaje; Igor Ulitsky; Sven Diederichs; Stefan Wiemann; Zohar Yakhini; Vessela N Kristensen; Anne-Lise Borresen-Dale; Yosef Yarden (2016)
    (Publication id: 000049475)
  • Rapid evolutionary adaptation to growth on an 'unfamiliar' carbon source.

    Zvi Tamari; Avihu H Yona; Yitzhak Pilpel; Naama Barkai (2016)
    (Publication id: 000049478)
  • A perspective on single cell behavior during infection

    Roi Avraham; Deborah T Hung (2016)
    (Publication id: 000049535)
  • Non-alcoholic fatty liver and the gut microbiota.

    Stavros Bashiardes; Hagit Shapiro; Shachar Rozin; Oren Shibolet; Eran Elinav (2016)
    (Publication id: 000049503)
  • Co-ChIP enables genome-wide mapping of histone mark co-occurrence at single-molecule resolution.

    Assaf Weiner; Astiaso, David Lara Astiaso; Vladislav Krupalnik; Ohad Gafni; Eyal David; Deborah R Winter; Jacob H Hanna; Ido Amit (2016)
    (Publication id: 000049504)
  • The multicellular nature of filamentous heterocyst-forming cyanobacteria

    Joel Stavans; Enrique Flores; Antonio Herrero (2016)
    (Publication id: 000049550)
  • Electrodynamic duality and vortex unbinding in driven-dissipative condensates

    Gideon Wachtel; L. M. Sieberer; S. Diehl; Ehud Altman; Robert Visse; Yishai Levin; Nir Kampf; Diego Adhemar Jaitin; Eyal David; Ido Amit; Hideaki Nagase (2016)
    (Publication id: 000049633)
  • Energy and protein feed-to-food conversion efficiencies in the US and potential food security gains from dietary changes

    Alon Shepon; Gil Eshel; Elad Noor; Ron Milo (2016)
    (Publication id: 000049595)
  • Distinct biological events generated by ECM proteolysis by two homologous collagenases

    Inna Solomonov; Eldar Zehorai; Dalit Talmi-Frank; Sharon G. Wolf; Alla Shainskaya; Alina Zhuravlev; Elena Kartvelishvily; Robert Visse; Yishai Levin; Nir Kampf; Diego Adhemar Jaitin; Eyal David; Ido Amit; Hideaki Nagase; Irit Sagi (2016)
    (Publication id: 000049637)
  • Evolution to the rescue: using comparative genomics to understand long non-coding RNAs

    Igor Ulitsky (2016)
    (Publication id: 000049617)
  • Repeat Size Determination by Two Molecular Rulers in the Type I-E CRISPR Array

    Moran G. Goren; Shany Doron; Rea Globus; Gil Amitai; Rotem Sorek; Udi Qimron (2016)
    (Publication id: 000049644)
  • Prediction of multidimensional drug dose responses based on measurements of drug pairs

    Anat Zimmer; Itay Katzir; Erez Dekel; Avraham E. Mayo; Uri Alon; Iair Arcavi; P. Challis; K. C. Chambers; T. -W. Chen; P. S. Cowperthwaite; Avishay Gal-Yam; G. Hosseinzadeh; D. A. Howell; C. Inserra; E. Kankare; E. A. Magnier; K. Maguire; P. A. Mazzali; C. McCully; D. Milisavljevic; K. W. Smith; S. Taubenberger; S. Valenti; R. J. Wainscoat; Ofer Yaron; D. R. Young (2016)
    (Publication id: 000049649)
  • pH determines the energetic efficiency of the cyanobacterial CO2 concentrating mechanism

    Niall M. Mangan; Avi Flamholz; Rachel D. Hood; Ron Milo; David F. Savage (2016)
    (Publication id: 000049659)
  • A Unique Assemblage of Engraved Plaquettes from Ein Qashish South, Jezreel Valley, Israel: Figurative and Non-Figurative Symbols of Late Pleistocene Hunters-Gatherers in the Levant

    Alla Yaroshevich; Ofer Bar-Yosef; Elisabetta Boaretto; Valentina Caracuta; Noam Greenbaum; Naomi Porat; Joel Roskin; Uri Alon (2016)
    (Publication id: 000049684)
  • A Fungal-Selective Cytochrome bc(1) Inhibitor Impairs Virulence and Prevents the Evolution of Drug Resistance

    Benjamin M. Vincent; Jean-Baptiste Langlois; Raja Srinivas; Alex K. Lancaster; Ruth Scherz-Shouval; Luke Whitesell; Bruce Tidor; Michal Mandelboim; Noam Stern-Ginossar (2016)
    (Publication id: 000049685)
  • Regioselectivity of third-row maingroup dicarbides, C2X (X = K-Br) for CO interaction: Fukui function and topological analyses

    Saroj K. Parida; Sridhar Sahu; Sagar Sharma; Ren Mao; Meirav Pevsner-Fischer; Shomron Ben-horin; Eran Elinav; Zhirong Zeng; Baili Chen; Yao He; Andy Peng Xiang; Minhu Chen (2016)
    (Publication id: 000049688)
  • A systematic view on influenza induced host shutoff

    Adi Bercovich-Kinori; Julie Tai; Idit Anna Gelbart; Alina Shitrit; Moshe, Shani Ben Moshe; Yaron Drori; Shalev Itzkovitz; Diego Restrepo; Hiroaki Matsunami; Yoav Gilad; Doron Lancet (2016)
    (Publication id: 000049689)
  • A tropical atmosphere model with moisture: global well-posedness and relaxation limit

    Jinkai Li; Edriss S. Titi; Ido Amit (2016)
    (Publication id: 000049671)
  • CRISPR-Cas: Spacer Diversity Determines the Efficiency of Defense

    Anna Lopatina; Rotem Sorek (2016)
    (Publication id: 000049724)
  • Nanoscale Engineering of Designer Cellulosomes

    Melissabye Gunnoo; Pierre-Andre Cazade; Albert Galera-Prat; Michael A. Nash; Mirjam Czjzek; Marek Cieplak; Beatriz Alvarez; Dana Morzaev; Smadar Kahana-Edwin; Ady Yosepovich; Einav Nili Gal-Yam; Raanan Berger; Iris Barshack; Eytan Domany; Bella Kaufman (2016)
    (Publication id: 000049729)
  • Natural selection underlies apparent stress-induced mutagenesis in a bacteriophage infection model

    Ido Yosef; Rotem Edgar; Asaf Levy; Gil Amitai; Rotem Sorek; Ariel Munitz; Udi Qimron; Bruno Mueller; Petr Tarkowski; David Weiss (2016)
    (Publication id: 000049765)
  • A two-step patterning process increases the robustness of periodic patterning in the fly eye

    Avishai Gavish; Naama Barkai (2016)
    (Publication id: 000049767)
  • Extracellular Matrix Proteolysis by MT1-MMP Contributes to InfluenzaInfluenza-Related Tissue Damage and Mortality

    Dalit Talmi-Frank; Zeev Altboum; Inna Solomonov; Tamar Ziv; Ido Amit; Irit Sagi (2016)
    (Publication id: 000049800)
  • A generic, cost-effective, and scalable cell lineage analysis platform

    Tamir Biezuner; Adam Spiro; Ofir Raz; Shiran Amir; Lilach Milo; Rivka Adar; Ilani, Noa Chapal Ilani; Veronika Berman; Yael Fried; Elena Ainbinder; Galit Cohen; Haim M. Barr; Ruth Halaban; Ehud Shapiro (2016)
    (Publication id: 000049833)
  • Exit from Synchrony in Joint Improvised Motion

    Assi Dahan; Lior Noy; Yuval Hart; Avi Mayo; Uri Alon (2016)
    (Publication id: 000049861)
  • Probiotics do not improve hepatic outcomes after Laparoscopic Sleeve Gastrectomy surgery: a randomized clinical trial

    Shiri Sherf Dagan; Shira Zelber-Sagi; Gili Zilberman-Schapira; Muriel Webb; Assaf Buch; Andrei Keidar; Asnat Raziel; Nasser Sakran; David Goitein; Natalia Goldenberg; Jemal A. Mahdi; Meirav Pevsner-Fischer; Niv Zmora; Mally Dori-Bachash; Eran Segal; Eran Elinav; Oren Shibolet (2016)
    (Publication id: 000049868)
  • Mitochondrial 16S rRNA Is Methylated by tRNA Methyltransferase TRMT61B in All Vertebrates

    Yaacov, Dan Bar Yaacov; Idan Frumkin; Yuka Yashiro; Takeshi Chujo; Yuma Ishigami; Yonatan Chemla; Amit Blumberg; Orr Schlesinger; Philipp Bieri; Basil Greber; Nenad Ban; Raz Zarivach; Lital Alfonta; Yitzhak Pilpel; Tsutomu Suzuki; Dan Mishmar (2016)
    (Publication id: 000049880)
  • A network-based analysis of colon cancer splicing changes reveals a tumorigenesis-favoring regulatory pathway emanating from ELK1

    Dror Hollander; Maya Donyo; Nir Atias; Keren Mekahel; Zeev Melamed; Sivan Yannai; Galit Lev-Maor; Asaf Shilo; Schraga Schwartz; Iris Barshack; Roded Sharan; Gil Ast (2016)
    (Publication id: 000049943)
  • Tumor suppressor crosstalk: Modulation of p53 activity by the Hippo pathway

    Moshe Oren; Noa Furth; Noa Bossel Ben-Moshe; Ziv Porat; Eytan Domany; Yair Pozniak; Tamar Geiger; Yael Aylon (2016)
    (Publication id: 000049965)
  • Making Sense of the Yeast Sphingolipid Pathway

    Marton Megyeri; H Riezman; Maya Schuldiner; Anthony H. Futerman (2016)
    (Publication id: 000049989)
  • > functions of long noncoding RNAs in development and stem cells

    Igor Ulitsky; RB Perry (2016)
    (Publication id: 000049979)
  • Characterization of proteome dynamics during growth in oleate reveals a new peroxisome-targeting receptor

    E Yifrach; SG Chuartzman; N Dahan; S Maskit; Lior Zada; Uri Weill; Ido Yofe; Tsviya Olender; Maya Schuldiner; Einat Zalckvar (2016)
    (Publication id: 000049993)
  • Persistent microbiome alterations modulate the rate of post-dieting weight regain

    CA Thaiss; SI Tav; D Rothschild; MTM Eijer; Matan Levy; C Moresi; L Dohnalova; Sofia Braverman; Shachar Rozin; Sergey Malitsky; M Dori-Bachash; Yael Kuperman; Inbal Biton; A Gertler; Alon Harmelin; Hagit Shapiro; Z Halpern; Amikam Aharoni; Eran Segal; Eran Elinav (2016)
    (Publication id: 000050036)
  • Capturing pairwise and multi-way chromosomal conformations using chromosomal walks

    Pedro Humberto Olivares-Chauvet; Zohar Mukamel; Aviezer Lifshitz; O Schwartzman; NO Elkayam; Yaniv Lubling; G Deikus; RP Sebra; Amos Tanay (2016)
    (Publication id: 000050048)
  • Microbiota Diumal Rhythmicity Programs Host Transcriptome Oscillations

    CA Thaiss; Matan Levy; Tal Korem; L Dohnalova; Hagit Shapiro; DA Jaitin; Eyal David; DR Winter; M Gury-BenAri; Evgeny Tatirovsky; Timur Tuganbaev; S Federici; Niv Zmora; Danny Zeevi; M Dori-Bachash; Meirav Pevsner-Fischer; Elena Kartvelishvily; Alexander Brandis; Alon Harmelin; O Shibolet; Z Halpern; K Honda; Ido Amit; Eran Segal; Eran Elinav (2016)
    (Publication id: 000050075)
  • An ensemble of regulatory elements controls Runx3 spatiotemporal expression in subsets of dorsal root ganglia proprioceptive neurons

    E Appe; S Weissmann; Yehuda Salzberg; Kira Orlovsky; Varda Negreanu; Michael Tsoory; Calanit Raanan; Ester Feldmesser; Y Bernstein; O Wolstein; Ditsa Levanon; Yoram Groner (2016)
    (Publication id: 000050055)
  • The Protein Cost of Metabolic Fluxes: Prediction from Enzymatic Rate Laws and Cost Minimization

    Elad Noor; Abraham Flamholz; Arren Bar-Even; Dan Davidi; Ron Milo; W Liebermeister (2016)
    (Publication id: 000050090)
  • An unrecognized function for COPII components in recruiting the viral replication protein BMV 1a to the perinuclear ER

    JH Li; Sara Fuchs; JT Zhang; S Wellford; Maya Schuldiner; XF Wang (2016)
    (Publication id: 000050098)
  • Evolutionary tradeoffs and the geometry of gene expression space

    Uri Alon (2016)
    (Publication id: 000050105)
  • SLE-KEY (R) ICHIP (R) PLATFORM IDENTIFIES A 'LUPUS AUTO-ANTIBODIES SIGNATURE' EARLY IN DISEASE WHICH PERSISTS INDEPENDENT OF DISEASE DURATION AND ACTIVITY

    Chaim Putterman; P Safer; K Jakobi; Rotem Sorek; I Gilkaite; S Wallace; AH Altice; DS Batty; Irun R. Cohen (2016)
    (Publication id: 000050113)
  • Combgap Promotes Ovarian Niche Development and Chromatin Association of EcR-BindingRegions in BR-C

    Anna Hitrik; Malka Popliker; Dana Gancz; Zohar Mukamel; Aviezer Lifshitz; Omer Schwartzman; Amos Tanay; Lilach Gilboa (2016)
    (Publication id: 000050263)
  • Dissecting Immune Circuits by Linking CRISPR-Pooled Screens with Single-Cell RNA-Seq

    Diego Adhemar Jaitin; Assaf Weiner; Ido Yofe; Astiaso, David Lara Astiaso; Hadas Keren-Shaul; Eyal David; Tomer Meir Salame; Amos Tanay; Oudenaarden, Alexander van Oudenaarden; Ido Amit (2016)
    (Publication id: 000050349)
  • Dealing with Gene-Dosage Imbalance during S Phase

    Raz Bar-Ziv; Yoav Voichek; Naama Barkai (2016)
    (Publication id: f171d606-6304-4c23-af66-edf55bb5264e)
  • A role for Rtt109 in buffering gene-dosage imbalance during DNA replication

    Yoav Voichek; Raz Bar-Ziv; Naama Barkai (2016)
    (Publication id: 8d03c588-6415-46f1-bf3c-55a04a17a511)
  • Would you like to play together? Adults' attachment and the mirror game

    Rinat Feniger-Schaal; Lior Noy; Yuval Hart; Nina Koren-Karie; Avraham E. Mayo; Uri Alon (2016)
    (Publication id: 000048072)
  • A Tunable Mechanism Determines the Duration of the Transgenerational Small RNA Inheritance in C. elegans

    Leah Houri-Ze'evi; Yael Korem; Hila Sheftel; Lior Faigenbloom; Itai Antoine Toker; Yael Dagan; Lama Awad; Luba Degani; Uri Alon; Oded Rechavi (2016)
    (Publication id: 231dad33-afda-4841-ace6-b0dbd1efab65)
  • Cinacalcet as adjunctive therapy in pseudohypoparathyroidism type 1b

    Tarak Srivastava; Jeffrey Krudys; Neil J. Mardis; Judith Sebestyen-VanSickle; Uri S. Alon (2016)
    (Publication id: 5b669836-12b5-4017-bc0e-c157a781dba9)
  • Dynamical compensation in physiological circuits

    Omer Karin; Avital Swisa; Benjamin Glaser; Yuval Dor; Uri Alon (2016)
    (Publication id: b1e84ffe-c519-49f3-9598-a267585b0679)
  • Interaction of Metabolome and Microbiome Contributes to Dietary Glycemia-induced Age-related Macular Degeneration in Aged C57BL/6J Mice

    Sheldon Rowan; Shuhong Iang; Min-Lee Chang; Ledrzej Szymanski; Tal Korem; Eran Segal; Christa Cassalman; Christina McGuire; James D. Balea; Clary B. Clish; Allen Taylor (2016)
    (Publication id: 268b7081-d5dd-4f42-8013-9d5c9385bbb3)
  • An essential role for UTX in resolution and activation of bivalent promoters

    Shilpa S. Dhar; Sung-Hun Lee; Kaifu Chen; Guangjing Zhu; WonKyung Oh; Kendra Allton; Ohad Gafni; Young Zoon Kim; Alin S. Tomoiga; Michelle Craig Barton; Jacob H. Hanna; Zhibin Wang; Wei Li; Min Gyu Lee (2016)
    (Publication id: ed8b88cd-a08f-45eb-8037-5af289becd77)
  • Failure to replicate the STAP cell phenomenon (vol 525, pg E6, 2015)

    Alejandro De Los Angeles; Francesco Ferrari; Yuko Fujiwara; Ronald Mathieu; Soohyun Lee; Semin Lee; Ho-Chou Tu; Samantha Ross; Stephanie Chou; Minh Nguyen; Zhaoting Wu; Thorold W. Theunissen; Benjamin E. Powell; Sumeth Imsoonthornruksa; Jiekai Chen; Marti Borkent; Vladislav Krupalnik; Ernesto Lujan; Marius Wernig; Jacob H. Hanna; Konrad Hochedlinger; Duanqing Pei; Rudolf Jaenisch; Hongkui Deng; Stuart H. Orkin; Peter J. Park; George Q. Daley (2016)
    (Publication id: 088f226b-0843-473c-95d1-7dad5c6a30e6)
  • Mice lacking WRB reveal differential biogenesis requirements of tail-anchored proteins in vivo

    Jhon Rivera-Monroy; Lena Musiol; Kirsten Unthan-Fechner; Akos Farkas; Anne Clancy; Javier Coy-Vergara; Uri Weill; Sarah Gockel; Shuh-Yow Lin; David P. Corey; Tobias Kohl; Philipp Stroebel; Maya Schuldiner; Blanche Schwappach; Fabio Vilardi (2016)
    (Publication id: 2679bdde-509a-4150-8c35-138b101d2d7c)
  • The SND proteins constitute an alternative targeting route to the endoplasmic reticulum

    Naama Aviram; Tslil Ast; Elizabeth A. Costa; Eric C. Arakel; Silvia G. Chuartzman; Calvin H. Jan; Sarah Hassenteufel; Johanna Dudek; Martin Jung; Stefan Schorr; Richard Zimmermann; Blanche Schwappach; Jonathan S. Weissman; Maya Schuldiner (2016)
    (Publication id: ce89f7e9-7998-46bb-962a-d7e47a82eb77)
  • A Tether is a Tether is a Tether: Tethering at Membrane Contact Sites

    Michel Eisenberg-Bord; Nadav Shai; Maya Schuldiner; Maria Bohnert (2016)
    (Publication id: 83ff3c62-16f3-464d-8248-987e4694efba)
  • Widespread formation of alternative 3 ' UTR isoforms via transcription termination in archaea

    Daniel Dar; Daniela Prasse; Ruth A. Schmitz; Rotem Sorek (2016)
    (Publication id: bcb8ca19-7984-4120-a6fd-f1354b86c772)
  • Water-Transfer Slows Aging in Saccharomyces cerevisiae

    Aviv Cohen; Esther Weindling; Efrat Rabinovich; Iftach Nachman; Shai Fuchs; Silvia Chuartzman; Lihi Gal; Maya Schuldiner; Shoshana Bar-Nun (2016)
    (Publication id: 77ca4054-97bb-4b0f-b691-c668ced1b419)
  • Regulation of membrane trafficking during glucose starvation.

    H. Hong; J. Y. Martinez-Marquez; L. Gal; M. Schuldiner; M. C. Duncan (2016)
    (Publication id: 30ba253a-bfc9-4cb2-9d97-9afd2dbfcbd9)
  • Identifying and characterizing contact sites between organelles.

    N. Shai; S. G. Chuartzman; L. Zada; E. Zalckvar; M. Schuldiner (2016)
    (Publication id: d9017aa7-6ecb-4fdd-93d3-447e02d22d9f)
  • Short Tandem Repeat stutter model inferred from direct measurement of in vitro stutter noise

    Ofir Raz; Tamir Biezuner; Adam Spiro; Shiran Amir; Lilach Milo; Alon Titelman; Amos Onn; Uriel Feige; Ehud Shapiro (2016)
    (Publication id: 000050153)
  • Regulation of membrane trafficking during glucose starvation.

    H. Hong; J. Y. Martinez-Marquez; Liron Gal; Maya Schuldiner; M. C. Duncan (2016)
    (Publication id: 000050579)
  • Interaction of Metabolome and Microbiome Contributes to Dietary Glycemia-induced Age-related Macular Degeneration in Aged C57BL/6J Mice

    Sheldon Rowan; Shuhong Iang; Min-Lee Chang; Ledrzej Szymanski; Tal Korem; Eran Segal; Christa Cassalman; Christina McGuire; James D. Balea; Clary B. Clish; Allen Taylor (2016)
    (Publication id: 000050572)
  • Pax6 role in the regulation of retinal pigmented epithelium maturation

    Yamit Cohen; Pablo Blinder; Maria Idelson; Benjamin Reubinoff; Shalev Itzkovitz; Ruth Ashery-Padan (2016)
    (Publication id: 000050565)
  • Inflammasomes and the microbiota-partners in the preservation of mucosal homeostasis

    Maayan Levy; Christoph Alexander Thaiss; Meirav N. Katz; Jotham Suez; Eran Elinav (2015)
    (Publication id: 000044925)
  • Simultaneous measurement of genome-wide transcription elongation speeds and rates of RNA polymerase II transition into active elongation with 4sUDRB-seq

    Gilad Fuchs; Yoav Voichek; Michal Rabani; Sima Benjamin; Shlomit Gilad; Ido Amit; Moshe Oren (2015)
    (Publication id: 53395)
  • MicroRNAs silence the noisy genome

    Yonit Hoffman; Yitzhak Pilpel (2015)
    (Publication id: 000045264)
  • Corrective jitter motion shows similar individual frequencies for the arm and the finger

    Lior Noy; Uri Alon; Jason Friedman (2015)
    (Publication id: 000045279)
  • Partitioning United States' feed consumption among livestock categories for improved environmental cost assessments

    Gil Eshel; Alon Shepon; T. Makov; Ron Milo (2015)
    (Publication id: 000045280)
  • Comparative Hi-C Reveals that CTCF Underlies Evolution of Chromosomal Domain Architecture

    Matteo Vietri Rudan; Christopher Barrington; Stephen Henderson; Christina Ernst; Duncan T. Odom; Amos Tanay; Suzana Hadjur (2015)
    (Publication id: 000045313)
  • Inferring biological tasks using Pareto analysis of high-dimensional data

    Yuval Hart; Hila Sheftel; Jean Hausser; Pablo Szekely; Noa Bossel Ben-Moshe; Yael Korem; Avichai Tendler; Avraham E. Mayo; Uri Alon (2015)
    (Publication id: 000045342)
  • Taming the inflammasome

    Maayan Levy; Christoph Alexander Thaiss; Eran Elinav (2015)
    (Publication id: 000045351)
  • Reply to Tichenor: Proposed update to beef greenhouse gas footprint is numerically questionable and well within current uncertainty bounds

    Gidon Eshel; Alon Shepon; Tamar Makov; Ron Milo (2015)
    (Publication id: 000045368)
  • Transcription factor binding dynamics during human ES cell differentiation

    Alexander M. Tsankov; Hongcang Gu; Veronika Akopian; Michael J. Ziller; Julie Donaghey; Ido Amit; Andreas Gnirke; Alexander Meissner (2015)
    (Publication id: 000045374)
  • m(6)A mRNA methylation facilitates resolution of naive pluripotency toward differentiation

    Shay Geula; Sharon Moshitch-Moshkovitz; Dan Dominissini; Abed AlFatah Mansour; Nitzan Kol; Mali Salmon-Divon; Vera Hershkovitz; Eyal Peer; Nofar Mor; Yair S. Manor; Moshe-Shay Ben-Haim; Eran Eyal; Sharon Yunger; Yishay Pinto; Diego Adhemar Jaitin; Sergey Viukov; Yoach Rais; Vladislav Krupalnik; Elad Chomsky; Mirie Zerbib; Itay Maza; Yoav Rechavi; Rada Massarwa; Suhair Hanna; Ido Amit; Erez Y. Levanon; Ninette Amariglio; Noam Stern-Ginossar; Noa Novershtern; Gideon Rechavi; Jacob H. Hanna (2015)
    (Publication id: 000045363)
  • Chromosome 7 gain and DNA hypermethylation at the HOXA10 locus are associated with expression of a stem cell related HOX-signature in glioblastoma

    Sebastian Kurscheid; Pierre Bady; Davide Sciuscio; Ivana Samarzija; Tal Shay; Irene Vassallo; Wim V. Criekinge; Roy T. Daniel; den Bent, Martin J. van den Bent; Christine Marosi; Michael Weller; Warren P. Mason; Eytan Domany; Roger Stupp; Mauro Delorenzi; Monika E. Hegi (2015)
    (Publication id: 000045436)
  • BREX is a novel phage resistance system widespread in microbial genomes

    Tamara Goldfarb; Hila Sberro; Eyal Weinstock; Ofir Cohen; Shany Doron; Yoav Charpak-Amikam; Shaked Afik; Gal Ofir; Rotem Sorek (2015)
    (Publication id: 000045470)
  • Symmetry Breaking in Homo-Oligomers: The Curious Case of Mega-Hemocyanin

    Hector Garcia Seisdedos; Avital Steinberg; Emmanuel Doram Levy (2015)
    (Publication id: 000045478)
  • SOX17 Is a Critical Specifier of Human Primordial Germ Cell Fate

    Naoko Irie; Leehee Weinberger; Walfred W. C. Tang; Toshihiro Kobayashi; Sergey Viukov; Yair S. Manor; Sabine Dietmann; Jacob H. Hanna; M. Azim Surani (2015)
    (Publication id: 000045465)
  • Artificial Sweeteners Induce Glucose Intolerance by Altering the Gut Microbiota EDITORIAL COMMENT

    Jotham Suez; Tal Korem; David Zeevi; Gili Zilberman-Schapira; Christoph Alexander Thaiss; Ori Maza; David Israeli; Niv Zmora; Shlomit Gilad; Adina Weinberger; Yael Kuperman; Alon Harmelin; Ilana Kolodkin-Gal; Hagit Shapiro; Zamir Halpern; Eran Segal; Eran Elinav (2015)
    (Publication id: 000045517)
  • Each cell counts: Hematopoiesis and immunity research in the era of single cell genomics

    Diego Adhemar Jaitin; Hadas Keren-Shaul; Naama Elefant; Ido Amit (2015)
    (Publication id: 000045571)
  • Decoding Viral Infection by Ribosome Profiling

    Noam Stern-Ginossar (2015)
    (Publication id: 000045649)
  • Integration of gene expression and GWAS results supports involvement of calcium signaling in Schizophrenia

    Libi Hertzberg; P. Katsel; P. Roussos; V. Haroutunian; Eytan Domany (2015)
    (Publication id: 53474)
  • CRISPR adaptation biases explain preference for acquisition of foreign DNA

    Asaf Levy; Moran G. Goren; Ido Yosef; Oren Auster; Miriam Manor; Gil Amitai; Rotem Edgar; Udi Qimron; Rotem Sorek (2015)
    (Publication id: 53488)
  • NF-kappa B Regulation by NLRs: T Cells Join the Club

    Christoph Alexander Thaiss; Eran Elinav (2015)
    (Publication id: 000045766)
  • Bursty Gene Expression in the Intact Mammalian Liver

    Keren Bahar Halpern; Sivan Tanami; Shanie Landen; Michal Chapal; Liran Szlak; Anat Hutzler; Anna Nizhberg; Shalev Itzkovitz (2015)
    (Publication id: 53399)
  • High-Resolution Chromatin Dynamics during a Yeast Stress Response

    Assaf Weiner; Tsung-Han S. Hsieh; Alon Appleboim; Hsiuyi V. Chen; Ayelet Rahat; Ido Amit; Oliver J. Rando; Nir Friedman (2015)
    (Publication id: 53513)
  • Spatial Fluctuations in Expression of the Heterocyst Differentiation Regulatory Gene hetR in Anabaena Filaments

    Laura Corrales-Guerrero; Asaf Tal; Rinat Arbel-Goren; Vicente Mariscal; Enrique Flores; Antonia Herrero; Joel Stavans (2015)
    (Publication id: 000045796)
  • Systematic Dissection of the Sequence Determinants of Gene 3 ' End Mediated Expression Control

    Ophir Shalem; Eilon Sharon; Shai Lubliner; Ifat Regev; Maya Lotan-Pompan; Zohar Yakhini; Eran Segal (2015)
    (Publication id: 000045797)
  • Evolutionary tradeoffs, Pareto optimality and the morphology of ammonite shells

    Avichai Tendler; Avraham Mayo; Uri Alon (2015)
    (Publication id: 53510)
  • Peroxisystem: Harnessing systems cell biology to study peroxisomes

    Maya Schuldiner; Einat Zalckvar (2015)
    (Publication id: 000045817)
  • An In Vivo Metabolic Approach for Deciphering the Product Specificity of Glycerate Kinase Proves that Both E. coli's Glycerate Kinases Generate 2-Phosphoglycerate

    Lior Zelcbuch; Manuel Razo-Mejia; Elad Herz; Sagit Yahav; Niv Antonovsky; Hagar Kroytoro; Ron Milo; Arren Bar-Even (2015)
    (Publication id: 53516)
  • Lam6 Regulates the Extent of Contacts between Organelles

    Y Elbaz-Alon; M Eisenberg-Bord; Vera Shinder; SB Stiller; Eyal Shimoni; N Wiedemann; T Geiger; Maya Schuldiner (2015)
    (Publication id: 000047289)
  • Transient acquisition of pluripotency during somatic cell transdifferentiation with iPSC reprogramming factors

    Itay Maza; Inbal Caspi; Asaf Zviran; Elad Chomsky; Yoach Rais; Sergey Viukov; Shay Geula; JD Buenrostro; Leehee Weinberger; Vladislav Krupalnik; S Hanna; Mirie Zerbib; JR Dutton; WJ Greenleaf; Rada Massarwa; Noa Novershtern; JH Hanna (2015)
    (Publication id: 000047309)
  • The Lamarckian chicken and the Darwinian egg

    Yitzhak Pilpel; O Rechavi (2015)
    (Publication id: 000047316)
  • DCs are ready to commit

    DR Winter; Ido Amit (2015)
    (Publication id: 000047322)
  • Lipid Droplets Are Essential for Efficient Clearance of Cytosolic Inclusion Bodies

    Ofer Moldavski; T Amen; Smadar Levin-Zaidman; Miriam Eisenstein; Ilana Rogachev; Alexander Brandis; Daniel Kaganovich; Maya Schuldiner (2015)
    (Publication id: 000047352)
  • GenoExp: a web tool for predicting gene expression levels from single nucleotide polymorphisms

    Ohad Manor; Eran Segal (2015)
    (Publication id: 000047368)
  • Editorial overview: Genome architecture and expression

    B Panning; Eran Segal (2015)
    (Publication id: 000047408)
  • Distinct Murine Mucosal Langerhans Cell Subsets Develop from Pre-dendritic Cells and Monocytes

    Tal Capucha; Gabriel Mizraji; Hadas Segev; Ronnie Blecher-Gonen; Deborah Winter; Abed Khalaileh; Yaara Tabib; Tsipora Attal; Maria Nassar; Katya Zelentsova; Hen Kisos; Martin Zenke; Kristin Sere; Thomas Hieronymus; Tal Burstyn-Cohen; Ido Amit; Asaf Wilensky; Avi-Hai Hovav (2015)
    (Publication id: 000047448)
  • Guanine polynucleotides are self-antigens for human natural autoantibodies and are significantly reduced in the human genome

    Ittai Fattal; Noam Shental; Shifra Ben-Dor; Yair Molad; Armando Gabrielli; Elisheva Pokroy-Shapira; Shirly Oren; Avi Livneh; Pnina Langevitz; Gisele Zandman-Goddard; Ofer Sarig; Raanan Margalit; Uzi Gafter; Eytan Domany; Irun R. Cohen (2015)
    (Publication id: 000047457)
  • Growth dynamics of gut microbiota in health and disease inferred from single metagenomic samples.

    Tal Korem; David Zeevi; Jotham Suez; Adina Weinberger; Sagi, Tali Avnit Sagi; Maya Pompan-Lotan; Elad Matot; Ghil Jona; Alon Harmelin; Nadav Cohen; Alexandra Sirota-Madi; Christoph Alexander Thaiss; Meirav Pevsner-Fischer; Rotem Sorek; Ramnik J. Xavier; Eran Elinav; Eran Segal (2015)
    (Publication id: 000047484)
  • Genome-Wide Screens in Saccharomyces cerevisiae Highlight a Role for Cardiolipin in Biogenesis of Mitochondrial Outer Membrane Multispan Proteins.

    Julia Sauerwald; Tobias Jores; Michal Eisenberg-Bord; Silvia Gabriela Chuartzman; Maya Schuldiner; Doron Rapaport (2015)
    (Publication id: 000047522)
  • Making the case for chromatin profiling: a new tool to investigate the immune-regulatory landscape

    Deborah R. Winter; Steffen Jung; Ido Amit (2015)
    (Publication id: 000047584)
  • The Mass-Longevity Triangle: Pareto Optimality and the Geometry of Life-History Trait Space.

    Pablo Szekely; Yael Korem; Uri Moran; Avi Mayo; Uri Alon (2015)
    (Publication id: 000047650)
  • Chronobiomics: The Biological Clock as a New Principle in Host-Microbial Interactions.

    Christoph Alexander Thaiss; Maayan Levy; Eran Elinav (2015)
    (Publication id: 000047651)
  • DNA Crossover Motifs Associated with Epigenetic Modifications Delineate Open Chromatin Regions in Arabidopsis.

    Shay Shilo; Cathy Melamed-Bessudo; Yanniv Dorone; Naama Barkai; Avraham Levy (2015)
    (Publication id: 000047652)
  • Reactivation of epigenetically silenced miR-512 and miR-373 sensitizes lung cancer cells to cisplatin and restricts tumor growth

    SA Harel; NB Ben-Moshe; Yael Aylon; DR Bublik; Neta Moskovits; G Toperoff; D Azaiza; F Biagoni; Gilad Fuchs; Sylvia Wilder; A Hellman; G Blandino; Eytan Domany; Moshe Oren (2015)
    (Publication id: 000047692)
  • Failure to replicate the STAP cell phenomenon

    Los Angeles, A. De Los Angeles; F. Ferrari; Y. Fujiwara; R. Mathieu; Seung Joon Lee; H.-C. Tu; S. Ross; S. Chou; M. Nguyen; Z. Wu; T.W. Theunissen; B.E. Powell; S. Imsoonthornruksa; Jun Chen; M. Borkent; Vladislav Krupalnik; E. Lujan; M. Wernig; J.H. Hanna (2015)
    (Publication id: 000047755)
  • Starvation-Dependent Regulation of Golgi Quality Control Links the TOR Signaling and Vacuolar Protein Sorting Pathways

    Niv Dobzinski; Silvia G. Chuartzman; Rachel Kama; Maya Schuldiner; Jeffrey Gerst (2015)
    (Publication id: 000047673)
  • Rationally designed, heterologous S. cerevisiae transcripts expose novel expression determinants

    Tuval Ben-Yehezkel; Shimshi Atar; Hadas Zur; Alon Diament; Eli Goz; Tzipy Marx; Rafael Cohen; Alexandra Dana; Anna Feldman; Ehud Shapiro; Tamir Tuller (2015)
    (Publication id: 000047682)
  • The Cost of Making Proteins

    Naama Barkai (2015)
    (Publication id: 000047840)
  • One library to make them all: Streamlining yeast library creation by a SWAp-Tag (SWAT) strategy

    Uri Weill; Ido Yofe; Silvia Chuartzman; Maya Schuldiner (2015)
    (Publication id: 000047841)
  • A novel regulator determines the extent of contacts between organelles

    Maya Schuldiner (2015)
    (Publication id: 000047894)
  • The J protein Djp1 is involved in the targeting of mitochondrial precursor proteins

    K. G. Hansen; Naama Aviram; Maya Schuldiner; J. M. Herrmann (2015)
    (Publication id: 000047897)
  • Diversion of aspartate in ASS1-deficient tumours fosters de novo pyrimidine synthesis

    Shiran Rabinovich; Lital Adler; Keren Yizhak; Alona Sarver; Alon Silberman; Shani Agron; Noa Stettner; Qin Sun; Alexander Brandis; Daniel Helbling; Stanley Korman; Shalev Itzkovitz; David Dimmock; Igor Ulitsky; Sandesh C. S. Nagamani; Eytan Ruppin; Ayelet Erez (2015)
    (Publication id: 000048033)
  • Down-regulation of LATS kinases alters p53 to promote cell migration.

    Noa Furth; Ben-Moshe, Noa Bossel Ben-Moshe; Yair Pozniak; Ziv Porat; Tamar Geiger; Eytan Domany; Yael Aylon; Moshe Oren (2015)
    (Publication id: 000048034)
  • A Relay Race on the Evolutionary Adaptation Spectrum

    Avihu H. Yona; Idan Frumkin; Yitzhak Pilpel (2015)
    (Publication id: 000048045)
  • The Transcription and Translation Landscapes during Human Cytomegalovirus Infection Reveal Novel Host-Pathogen Interactions.

    Osnat Tirosh; Yifat Cohen; Alina Shitrit; Odem Shani; Vu Thuy Khanh Le-Trilling; Mirko Trilling; Gilgi Friedlander; Marvin Tanenbaum; Noam Stern-Ginossar (2015)
    (Publication id: 000048064)
  • Metagenomic cross-talk: the regulatory interplay between immunogenomics and the microbiome.

    Maayan Levy; Christoph Alexander Thaiss; Eran Elinav (2015)
    (Publication id: 000048067)
  • Microbiota-Modulated Metabolites Shape the Intestinal Microenvironment by Regulating NLRP6 Inflammasome Signaling.

    Maayan Levy; Christoph Alexander Thaiss; David Zeevi; Lenka Dohnalova; Gili Zilberman-Schapira; Jemal Ali Mahdi; Eyal David; Alon Savidor; Tal Korem; Yonatan Herzig; Meirav Pevsner-Fischer; Hagit Shapiro; Anette Christ; Alon Harmelin; Zamir Halpern; Eicke Latz; Richard A Flavell; Ido Amit; Eran Segal; Eran Elinav (2015)
    (Publication id: 000048089)
  • Cell scientist to watch - Maya Schuldiner

    Anna Bobrowska; Maya Schuldiner (2015)
    (Publication id: 000048108)
  • Transcriptional Heterogeneity and Lineage Commitment in Myeloid Progenitors

    Paul [Unknown]; Ya'ara Arkin; Amir Giladi; B T Porse; Amos Tanay; Ido Amit; Steffen Jung (2015)
    (Publication id: 000048070)
  • Ribosome Profiling As A Tool To Decipher Viral Complexity

    Noam Stern-Ginossar; Nicholas T. Ingolia (2015)
    (Publication id: 000048056)
  • Noise in gene expression is coupled to growth rate.

    Leeat Keren; Dijk, David Van Dijk; Shira Weingarten-Gabbay; Dan Davidi; Ghil Jona; Adina Weinberger; Ron Milo; Eran Segal (2015)
    (Publication id: 000048080)
  • Personalized Nutrition by Prediction of Glycemic Responses.

    David Zeevi; Tal Korem; Niv Zmora; David Israeli; Daphna Rothschild; Adina Weinberger; Orly Ben-Yacov; Dar Lador; Sagi, Tali Avnit Sagi; Maya Lotan-Pompan; Jotham Suez; Jemal Ali Mahdi; Elad Matot; Gal Malka; Noa Kosower; Michal Rein; Gili Zilberman-Schapira; Lenka Dohnalova; Meirav Pevsner-Fischer; Rony Bikovsky; Zamir Halpern; Eran Elinav; Eran Segal (2015)
    (Publication id: 000048060)
  • Recurrent inactivating RASA2 mutations in melanoma

    Rand Arafeh; Nouar Qutob; Rafi Emmanuel; Alona Keren-Paz; Jason Madore; Abdel Elkahloun; James S. Wilmott; Jared J. Gartner; Pizio, Antonella Di Pizio; Sabina Winograd-Katz; Sivasish Sindiri; Ron Rotkopf; Ken Dutton-Regester; Peter Johansson; Antonia L. Pritchard; Nicola Waddell; Victoria K. Hill; Jimmy C. Lin; Yael Hevroni; Steven A. Rosenberg; Javed Khan; Shifra Ben-Dor; Masha Y. Niv; Igor Ulitsky; Graham J. Mann; Richard A. Scolyer; Nicholas K. Hayward; Yardena Samuels (2015)
    (Publication id: 000048082)
  • Nuclear Retention of mRNA in Mammalian Tissues

    Keren Bahar Halpern; Inbal Caspi; Doron Lemze; Maayan Levy; Shanie Landen; Eran Elinav; Igor Ulitsky; Shalev Itzkovitz (2015)
    (Publication id: 000048125)
  • A Regression-Based Analysis of Ribosome-Profiling Data Reveals a Conserved Complexity to Mammalian Translation

    Alexander P. Fields; Edwin H. Rodriguez; Marko Jovanovic; Noam Stern-Ginossar; Brian J. Haas; Philipp Mertins; Raktima Raychowdhury; Nir Hacohen; Steven A. Carr; Nicholas T. Ingolia; Aviv Regev; Jonathan S. Weissman (2015)
    (Publication id: 000048262)
  • The Moderately Efficient Enzyme: Futile Encounters and Enzyme Floppiness

    Arren Bar-Even; Ron Milo; Elad Noor; Dan Tawfik (2015)
    (Publication id: 000048382)
  • Failure to replicate the STAP cell phenomenon

    Los Angeles, Alejandro De Los Angeles; Francesco Ferrari; Yuko Fujiwara; Ronald Mathieu; Soohyun Lee; Semin Lee; Ho-Chou Tu; Samantha Ross; Stephanie Chou; Nguyen [Unknown]; Zhaoting Wu; Thorold W. Theunissen; Benjamin E. Powell; Sumeth Imsoonthornruksa; Jiekai Chen; Marti Borkent; Vladislav Krupalnik; Ernesto Lujan; Marius Wernig; Jacob H. Hanna; Konrad Hochedlinger; Duanqing Pei; Rudolf Jaenisch; Hongkui Deng; Stuart H. Orkin; Peter J. Park; George Q. Daley (2015)
    (Publication id: 000048383)
  • The Cost of Making Proteins

    Naama Barkai (2015)
    (Publication id: 000048433)
  • One library to make them all: Streamlining yeast library creation by a SWAp-Tag (SWAT) strategy

    Uri Weill; Ido Yofe; Silvia Chuartzman; Maya Schuldiner (2015)
    (Publication id: 000048434)
  • From mass cytometry to cancer prognosis

    Deborah R. Winter; Guy Ledergor; Ido Amit (2015)
    (Publication id: 000048435)
  • Umi-4C: A Quantitative, Robust and Multiplexed Method to Study the Regulatory Three Dimensional Chromatin Organization - Application for the Mgakaryocytic-Eythroid Lineage

    Omer Schwartzman; Zohar Mukamel; Shai Izraeli; Amos Tanay (2015)
    (Publication id: 000048461)
  • Diurnal suppression of EGFR signaling by glucocorticoids: implications for tumor progression and treatment

    Mattia Lauriola; Yehoshua Enuka; Amit Zeisel; Gabriele Matteo D'Uva; Lee Roth; Silvia Carvalho; R Solmi; Eytan Domany; Yosef Yarden (2015)
    (Publication id: 000048659)
  • Tumor evolution inferred by patterns of miRNA expression through the course of disease, therapy and recurrence in breast cancer

    Maya Dadiani; Noa Bossel; S Paluch-Shimon; G Peri; A Pavlovski; S Kahana-Edwin; N Balint; A Yosepovich; A Zundelevich; E Gal-Yam; R Berger; I Barshack; Eytan Domany; B Kaufman (2015)
    (Publication id: 000048658)
  • Pathogen Cell-to-Cell Variability Drives Heterogeneity in Host Immune Responses

    Roi Avraham; Nathan Haseley; Douglas Brown; Cristina Penaranda; Humberto B. Jijon; John J. Trombetta; Rahul Satija; Alex K. Shalek; Ramnik J. Xavier; Aviv Regev; Deborah T. Hung (2015)
    (Publication id: 000048864)
  • Third Report on Chicken Genes and Chromosomes 2015

    Michael Schmid; Jacqueline Smith; David W. Burt; Bronwen L. Aken; Parker B. Antin; Alan L. Archibald; Chris Ashwell; Perry J. Blackshear; Clarissa Boschiero; C. Titus Brown; Shane C. Burgess; Hans H. Cheng; William Chow; Derrick J. Coble; Amanda Cooksey; Richard P. M. A. Crooijmans; Joana Damas; Richard V. N. Davis; Koning, Dirk-Jan de Koning; Mary E. Delany; Thomas Derrien; Takele T. Desta; Ian C. Dunn; Matthew Dunn; Hans Ellegren; Lel Eoery; Ionas Erb; Marta Farre; Mario Fasold; Damarius Fleming; Paul Flicek; Katie E. Fowler; Laure Fresard; David P. Froman; Valerie Garceau; Paul P. Gardner; Almas A. Gheyas; Darren K. Griffin; Martien A. M. Groenen; Thomas Haaf; Olivier Hanotte; Alan Hart; Julien Haesler; S. Blair Hedges; Jana Hertel; Kerstin Howe; Allen Hubbard; David A. Hume; Pete Kaiser; Darek Kedra; Stephen J. Kemp; Christophe Klopp; Kalmia E. Kniel; Richard Kuo; Sandrine Lagarrigue; Susan J. Lamont; Denis M. Larkin; Raman A. Lawal; Sarah M. Markland; Fiona McCarthy; Heather A. McCormack; Marla C. McPherson; Akira Motegi; Stefan A. Muljo; Andrea Muensterberg; Rishi Nag; Indrajit Nanda; Michael Neuberger; Anne Nitsche; Cedric Notredame; Harry Noyes; Rebecca O'Connor; Elizabeth A. O'Hare; Andrew J. Oler; Sheila C. Ommeh; Helio Pais; Michael Persia; Frederique Pitel; Likit Preeyanon; Pablo Prieto Barja; Elizabeth M. Pritchett; Douglas D. Rhoads; Charmaine M. Robinson; Michael N. Romanov; Max Rothschild; Pierre-Francois Roux; Carl J. Schmidt; Alisa-Sophia Schneider; Matthew G. Schwartz; Steve M. Searle; Michael A. Skinner; Craig A. Smith; Peter F. Stadler; Tammy E. Steeves; Claus Steinlein; Liang Sun; Minoru Takata; Igor Ulitsky; Qing Wang; Ying Wang; Wesley C. Warren; Jonathan M. D. Wood; David Wragg; Huaijun Zhou (2015)
    (Publication id: 000049268)
  • A cellular and regulatory map of the cholinergic nervous system of C. elegans

    Laura Pereira; Paschalis Paschalis Kratsios; Esther Serrano-Saiz; Hila Sheftel; Avi E. Mayo; David H. Hall; John G. White; Brigitte LeBoeuf; L. Rene Garcia; Uri Alon; Oliver Hobert (2015)
    (Publication id: 5390606f-9a4a-47e8-8206-508193bd956a)
  • The Evolutionary Potential of Phenotypic Mutations

    Hayato Yanagida; Ariel Gispan; Noam Kadouri; Shelly Rozen; Michal Sharon; Naama Barkai; Dan S. Tawfik (2015)
    (Publication id: 000047554)
  • Editorial overview: Cell organelles: Organelle communication: new means and new views.

    Maya Schuldiner (2015)
    (Publication id: 000047526)
  • Quantitative visualization of alternative exon expression from RNA-seq data

    Yarden Katz; Eric T. Wang; Jacob Silterra; Schraga Schwartz; Bang Wong; Helga Thorvaldsdottir; James T. Robinson; Jill P. Mesirov; Edoardo M. Airoldi; Christopher B. Burge (2015)
    (Publication id: 2164970f-a9d4-4de8-8241-2a81758ff22e)
  • Immunogenetics. Dynamic profiling of the protein life cycle in response to pathogens

    Marko Jovanovic; Michael S Rooney; Philipp Mertins; Dariusz Przybylski; Nicolas Chevrier; Rahul Satija; Edwin H Rodriguez; Alexander P Fields; Schraga Schwartz; Raktima Raychowdhury; Maxwell R Mumbach; Thomas Eisenhaure; Michal Rabani; Dave Gennert; Diana Lu; Toni Delorey; Jonathan S Weissman; Steven A Carr; Nir Hacohen; Aviv Regev (2015)
    (Publication id: 700e47d3-3fdf-404c-b3e4-f41a31dc8a15)
  • Epstein-Barr virus antibodies mark systemic lupus erythematosus and scleroderma patients negative for anti-DNA

    Ittai Fattal; Noam Shental; Yair Molad; Armando Gabrielli; Elisheva Pokroy-Shapira; Shirly Oren; Avi Livneh; Pnina Langevitz; Rachel Pauzner; Ofer Sarig; Uzi Gafter; Eytan Domany; Irun R. Cohen (2014)
    (Publication id: 51734)
  • Inference of Tumor Evolution during Chemotherapy by Computational Modeling and In Situ Analysis of Genetic and Phenotypic Cellular Diversity

    Vanessa Almendro; Yu-Kang Cheng; Amanda Randles; Shalev Itzkovitz; Andriy Marusyk; Elisabet Ametller; Xavier Gonzalez-Farre; Montse Munoz; Hege G. Russnes; Aslaug Helland; Inga H. Rye; Anne-Lise Borresen-Dale; Reo Maruyama; Oudenaarden, Alexander van Oudenaarden; Mitchell Dowsett; Robin L. Jones; Jorge Reis-Filho; Pere Gascon; Mithat Goenen (2014)
    (Publication id: 51812)
  • Phenotypic noise: effects of post-transcriptional regulatory processes affecting mRNA

    Rinat Arbel-Goren; Asaf Tal; Joel Stavans (2014)
    (Publication id: 000003359)
  • Scaling of dorsal-ventral patterning in the Xenopus laevis embryo

    Danny Ben-Zvi; Abraham Fainsod; Ben-Zion Shilo; Naama Barkai (2014)
    (Publication id: 51818)
  • LoQAtE-Localization and Quantitation ATlas of the yeast proteomE. A new tool for multiparametric dissection of single-protein behavior in response to biological perturbations in yeast

    Michal Breker; Melissa Gymrek; Ofer Moldavski; Maya Schuldiner (2014)
    (Publication id: 51906)
  • Subcellular Transcriptomics-Dissection of the mRNA Composition in the Axonal Compartment of Sensory Neurons

    Adi Minis; Dvir Dahary; Ohad Manor; Dena Leshkowitz; Yitzhak Pilpel; Avraham Yaron (2014)
    (Publication id: 51784)
  • The Back and Forth of Cargo Exit from the Endoplasmic Reticulum

    Yosef Geva; Maya Schuldiner (2014)
    (Publication id: 000015203)
  • miR-661 downregulates both Mdm2 and Mdm4 to activate p53

    Yonit Hoffman; D. R. Bublik; Yitzhak Pilpel; Moshe Oren (2014)
    (Publication id: 51742)
  • Massively Parallel Single-Cell RNA-Seq for Marker-Free Decomposition of Tissues into Cell Types

    Diego Adhemar Jaitin; Ephraim Kenigsberg; Hadas Keren-Shaul; Naama Elefant; Franziska Paul; Irina Zaretsky; Alexander Mildner; Nadav Cohen; Steffen Jung; Amos Tanay; Ido Amit (2014)
    (Publication id: 51924)
  • Landscape and variation of RNA secondary structure across the human transcriptome

    Yue Wan; Kun Qu; Qiangfeng Cliff Zhang; Ryan A. Flynn; Ohad Manor; Zhengqing Ouyang; Jiajing Zhang; Robert C. Spitale; Michael P. Snyder; Eran Segal; Howard Y. Chang (2014)
    (Publication id: 51801)
  • Primers-4-Yeast: a comprehensive web tool for planning primers for Saccharomyces cerevisiae

    Ido Yofe; Maya Schuldiner (2014)
    (Publication id: 51880)
  • A defect in the RNA-processing protein HNRPDL causes limb-girdle muscular dystrophy 1G (LGMD1G)

    Natassia M. Vieira; Michel S. Naslavsky; Luciana Licinio; Fernando Kok; David Schlesinger; Mariz Vainzof; Nury Sanchez; Joao Paulo Kitajima; Lihi Gal; Natale Cavacana; Peter R. Serafini; Silvia Chuartzman; Cristina Vasquez; Adriana Mimbacas; Vincenzo Nigro; Rita C. Pavanello; Maya Schuldiner; Louis M. Kunkel; Mayana Zatz (2014)
    (Publication id: 52523)
  • Lineage grammars: describing, simulating and analyzing population dynamics

    Adam Spiro; Luca Cardelli; Ehud Shapiro (2014)
    (Publication id: 52570)
  • Analysis of the transcriptional networks underpinning the activation of murine macrophages by inflammatory mediators

    Sobia Raza; Mark W. Barnett; Itzhaki, Zohar Barnett Itzhaki; Ido Amit; David A. Hume; Tom C. Freeman (2014)
    (Publication id: 52510)
  • Increasing creativity using the placebo effect

    Liron Rozenkrantz; Lior Noy; Yuval Hart; Avi Mayo; Uri Alon (2014)
    (Publication id: 000044223)
  • Embracing the void-how much do we really know about targeting and translocation to the endoplasmic reticulum?

    Naama Aviram; Maya Schuldiner (2014)
    (Publication id: 000044238)
  • Yeast phospholipid biosynthesis is linked to mRNA localization

    Orit Hermesh; Christian Genz; Ido Yofe; Monika Sinzel; Doron Rapaport; Maya Schuldiner; Ralf-Peter Jansen (2014)
    (Publication id: 000044241)
  • mRNA-programmed translation pauses in the targeting of E. coli membrane proteins.

    Nir Fluman; Sivan Navon; Eitan Bibi; Yitzhak Pilpel (2014)
    (Publication id: 52589)
  • Logarithmic and Power Law Input-Output Relations in Sensory Systems with Fold-Change Detection

    Miri Adler; Avi Mayo; Uri Alon (2014)
    (Publication id: 52612)
  • Land, irrigation water, greenhouse gas, and reactive nitrogen burdens of meat, eggs, and dairy production in the United States

    Gidon Eshel; Alon Shepon; Tamar Makov; Ron Milo (2014)
    (Publication id: 52549)
  • Intratumor DNA Methylation Heterogeneity Reflects Clonal Evolution in Aggressive Prostate Cancer

    David Brocks; Yassen Assenov; Sarah Minner; Olga Bogatyrova; Ronald Simon; Christina Koop; Christopher Oakes; Manuela Zucknick; Daniel Bernhard Lipka; Joachim Weischenfeldt; Lars Feuerbach; Richard Cowper-Sal Lari; Mathieu Lupien; Benedikt Brors; Jan Korbel; Thorsten Schlomm; Amos Tanay; Guido Sauter; Clarissa Gerhaeuser; Christoph Plass (2014)
    (Publication id: 52624)
  • Sequestration of a two-component response regulator by a riboswitch-regulated noncoding RNA

    J. R. Mellin; Mikael Koutero; Daniel Dar; Marie-Anne Nahori; Rotem Sorek; Pascale Cossart (2014)
    (Publication id: 52563)
  • Chromatin state dynamics during blood formation

    Astiaso, David Lara Astiaso; Assaf Weiner; Vivas, Erika Lorenzo Vivas; Irina Zaretsky; Diego Adhemar Jaitin; Eyal David; Hadas Keren-Shaul; Alexander Mildner; Deborah Winter; Steffen Jung; Nir Friedman; Ido Amit (2014)
    (Publication id: 52557)
  • Paradoxical Signaling by a Secreted Molecule Leads to Homeostasis of Cell Levels

    Yuval Hart; Shlomit Reich-Zeliger; Yaron E. Antebi; Irina Zaretsky; Avraham E. Mayo; Uri Alon; Nir Friedman (2014)
    (Publication id: 000044303)
  • Using High-Throughput Transcriptomic Data for Prognosis: A Critical Overview and Perspectives

    Eytan Domany (2014)
    (Publication id: 52627)
  • The role of chromatin dynamics in immune cell development

    Deborah R. Winter; Ido Amit (2014)
    (Publication id: 000044319)
  • Dynamic and static maintenance of epigenetic memory in pluripotent and somatic cells

    Zohar Shipony; Zohar Mukamel; Netta Mendelson Cohen; Gilad Landan; Elad Chomsky; Shlomit Reich Zeliger; Yael Chagit Fried; Elena Ainbinder; Nir Friedman; Amos Tanay (2014)
    (Publication id: 000044352)
  • Passage Number is a Major Contributor to Genomic Structural Variations in Mouse iPSCs

    Pengfei Liu; Anna Kaplan; Bo Yuan; Jacob H. Hanna; James R. Lupski; Orly Reiner (2014)
    (Publication id: 52704)
  • Aging-induced type I interferon response at the choroid plexus negatively affects brain function

    Kuti Baruch; Aleksandra Deczkowska; Eyal David; Joseph M. Castellano; Omer Miller; Alexander Kertser; Tamara Berkutzki; Itzhaki, Zohar Barnett Itzhaki; Dana Bezalel; Tony Wyss-Coray; Ido Amit; Michal Schwartz (2014)
    (Publication id: 52441)
  • Fast and Accurate Discovery of Degenerate Linear Motifs in Protein Sequences

    Abdellali Kelil; Benjamin Dubreuil; Emmanuel Doram Levy; Stephen W. Michnick (2014)
    (Publication id: 52648)
  • A simple cage-autonomous method for the maintenance of the barrier status of germ-free mice during experimentation

    Gil Hecht; C. Bar-Nathan; G. Milite; Ilana Alon; Yuval Moshe; Lea Greenfeld; Natalya Dotsenko; Jotham Suez; Moshe Levy; Christoph Alexander Thaiss; Hagit Dafni; Eran Elinav; Alon Harmelin (2014)
    (Publication id: 52640)
  • microRNAs and Alu elements in the p53-Mdm2-Mdm4 regulatory network

    Yonit Hoffman; Yitzhak Pilpel; Moshe Oren (2014)
    (Publication id: 000044439)
  • The grammar of transcriptional regulation

    Shira Weingarten-Gabbay; Eran Segal (2014)
    (Publication id: 000044431)
  • Accurate, Model-Based Tuning of Synthetic Gene Expression Using Introns in S. cerevisiae

    Ido Yofe; Zohar Zafrir; Rachel Blau; Maya Schuldiner; Tamir Tuller; Ehud Shapiro; Tuval Ben-Yehezkel (2014)
    (Publication id: 52437)
  • Single cell analysis exposes intratumor heterogeneity and suggests that FLT3-ITD is a late event in leukemogenesis

    Roni Shouval; Liran I Shlush; Shlomit Yehudai-Resheff; Shahnaz Ali; Neta Pery; Ehud Shapiro; Maty Tzukerman; Jacob M. Rowe; Tsila Zuckerman (2014)
    (Publication id: 52430)
  • Different subunits belonging to the same protein complex often exhibit discordant expression levels and evolutionary properties

    Or Matalon; Amnon Horovitz; Emmanuel Doram Levy (2014)
    (Publication id: 52562)
  • The PH gene determines fruit acidity and contributes to the evolution of sweet melons

    Shahar Cohen; Maxim Itkin; Yelena Yeselson; Galil Tzuri; Vitaly Portnoy; Rotem Harel-Baja; Shery Lev; Uzi Sa'ar; Rachel Davidovitz-Rikanati; Nadine Baranes; Einat Bar; Dalia Wolf; Marina Petreikov; Shmuel Shen; Shifra Ben-Dor; Ilana Rogachev; Asaph Aharoni; Tslil Ast; Maya Schuldiner; Eduard Belausov; Ravit Eshed; Ron Ophir; Amir Sherman; Benedikt Frei; H. Ekkehard Neuhaus; Yimin Xu; Zhangjun Fei; Jim Giovannoni; Efraim Lewinsohn; Yaakov Tadmor; Harry S. Paris; Nurit Katzir; Yosef Burger; Arthur A. Schaffer (2014)
    (Publication id: 52358)
  • Visual account of protein investment in cellular functions

    Wolfram Liebermeister; Elad Noor; Avi Flamholz; Dan Davidi; Joerg Bernhardt; Ron Milo (2014)
    (Publication id: 52314)
  • Exploring New Horizons in Microbiome Research

    Christoph Alexander Thaiss; Eran Elinav (2014)
    (Publication id: 52522)
  • In pursuit of design principles of regulatory sequences

    Michal Levo; Eran Segal (2014)
    (Publication id: 000044547)
  • The emergence of proteome-wide technologies: systematic analysis of proteins comes of age

    Michal Breker; Maya Schuldiner (2014)
    (Publication id: 000044548)
  • Blastocyst implantation failure relates to impaired translational machinery gene expression

    Vicki Plaks; Eran Gershon; Amit Zeisel; Jasmine Jacob-Hirsch; Michal Neeman; Elke Winterhager; Gideon Rechavi; Eytan Domany; Nava Dekel (2014)
    (Publication id: 52290)
  • A Dynamic Interface between Vacuoles and Mitochondria in Yeast

    Yael Elbaz-Alon; Eden Rosenfeld-Gur; Vera Shinder; Anthony H. Futerman; Tamar Geiger; Maya Schuldiner (2014)
    (Publication id: 52364)
  • STEM CELLS The quest for the perfect reprogrammed cell

    Vladislav Krupalnik; Jacob H. Hanna (2014)
    (Publication id: 000044599)
  • Fur Is the Master Regulator of the Extraintestinal Pathogenic Escherichia coli Response to Serum

    Sagi Huja; Yaara Oren; Dvora Biran; Susann Meyer; Ulrich Dobrindt; Joerg Bernhard; Doerte Becher; Michael Hecker; Rotem Sorek; Eliora Z. Ron (2014)
    (Publication id: 52644)
  • A cytosolic degradation pathway, prERAD, monitors pre-inserted secretory pathway proteins

    Tslil Ast; Naama Aviram; Silvia Gabriela Chuartzman; Maya Schuldiner (2014)
    (Publication id: 52345)
  • Divergence and Selectivity of Expression-Coupled Histone Modifications in Budding Yeasts

    Yaron Mosesson; Yoav Voichek; Naama Barkai (2014)
    (Publication id: 52402)
  • Genetic and Phenotypic Diversity in Breast Tumor Metastases

    Vanessa Almendro; Hee Jung Kim; Yu-Kang Cheng; Mithat Goenen; Shalev Itzkovitz; Pedram Argani; Oudenaarden, Alexander van Oudenaarden; Saraswati Sukumar; Franziska Michor; Kornelia Polyak (2014)
    (Publication id: 52002)
  • Molecular Rules Governing De Novo Methylation in Cancer

    Deborah Nejman; Ravid Straussman; Israel Steinfeld; Michael Ruvolo; Douglas Roberts; Zohar Yakhini; Howard Cedar (2014)
    (Publication id: 52070)
  • NLRP6 Inflammasome Orchestrates the Colonic Host-Microbial Interface by Regulating Goblet Cell Mucus Secretion

    Marta Wlodarska; Christoph Alexander Thaiss; Roni Nowarski; Jorge Henao-Mejia; Jian-Ping Zhang; Eric M. Brown; Gad Frankel; Maayan Levy; Meirav N. Katz; William M. Philbrick; Eran Elinav; B. Brett Finlay; Richard A. Flavell (2014)
    (Publication id: 51964)
  • Noise Genetics: Inferring Protein Function by Correlating Phenotype with Protein Levels and Localization in Individual Human Cells

    Shlomit Farkash-Amar; Anat Zimmer; Eran Eden; Ariel Cohen; Zatorsky, Naama Geva Zatorsky; Lydia Cohen; Ron Milo; Alex Sigal; Tamar Danon; Uri Alon (2014)
    (Publication id: 52304)
  • High-Resolution Mapping of Protein Concentration Reveals Principles of Proteome Architecture and Adaptation

    Emmanuel Doram Levy; Jacqueline Kowarzyk; Stephen W. Michnick (2014)
    (Publication id: 52256)
  • Scaling morphogen gradients during tissue growth by a cell division rule

    Inna Averbukh; Danny Ben-Zvi; Siddhartha Mishra; Naama Barkai (2014)
    (Publication id: 52115)
  • Linear Superposition and Prediction of Bacterial Promoter Activity Dynamics in Complex Conditions

    Daphna Rothschild; Erez Dekel; Jean Hausser; Anat Bren; Guy Aidelberg; Pablo Szekely; Uri Alon (2014)
    (Publication id: 52318)
  • The Biggest Challenges Facing Young Scientists

    David Keays; Luis Barreiro; Devi Stuart-Fox; Gloria Brar; Maya Schuldiner; Mamta Tahiliani (2014)
    (Publication id: 000044871)
  • The Fire Within: Microbes Inflame Tumors

    Nicola Gagliani; Bo Hu; Samuel Huber; Eran Elinav; Richard A. Flavell (2014)
    (Publication id: 000044872)
  • Location of the unique integration site on an Escherichia coli chromosome by bacteriophage lambda DNA in vivo

    Asaf Tal; Rinat Arbel-Goren; Nina Costantino; Donald L. Court; Joel Stavans (2014)
    (Publication id: 52198)
  • A Fundamental Trade-off in Covalent Switching and Its Circumvention by Enzyme Bifunctionality in Glucose Homeostasis

    Tathagata Dasgupta; David H. Croll; Jeremy A. Owen; Heiden, Matthew G. Vander Heiden; Jason W. Locasale; Uri Alon; Lewis C. Cantley; Jeremy Gunawardena (2014)
    (Publication id: 52133)
  • A Negative Feedback Loop of Transcription Factors Specifies Alternative Dendritic Cell Chromatin States

    Chamutal Bornstein; Deborah Winter; Itzhaki, Zohar Barnett Itzhaki; Eyal David; Sabah Kadri; Manuel Garber; Ido Amit (2014)
    (Publication id: 53041)
  • Chronic exposure to TGF beta 1 regulates myeloid cell inflammatory response in an IRF7-dependent manner

    Merav Cohen; Orit Matcovitch; Eyal David; Itzhaki, Zohar Barnett Itzhaki; Hadas Keren-Shaul; Ronnie Blecher-Gonen; Diego Adhemar Jaitin; Antonio Sica; Ido Amit; Michal Schwartz (2014)
    (Publication id: 52996)
  • Tissue-Resident Macrophage Enhancer Landscapes Are Shaped by the Local Microenvironment

    Yonit Lavin; Deborah Winter; Ronnie Blecher-Gonen; Eyal David; Hadas Keren-Shaul; Miriam Merad; Steffen Jung; Ido Amit (2014)
    (Publication id: 53009)
  • Loss of growth homeostasis by genetic decoupling of cell division from biomass growth: implication for size control mechanisms

    Hannah Schmidt-Glenewinkel; Naama Barkai (2014)
    (Publication id: 53070)
  • Molecular dissection of the genetic mechanisms that underlie expression conservation in orthologous yeast ribosomal promoters

    Danny Zeevi; Shai Lubliner; Maya Lotan-Pompan; Eran Hodis; Rita Vesterman; Adina Weinberger; Eran Segal (2014)
    (Publication id: 52975)
  • OM14 is a mitochondrial receptor for cytosolic ribosomes that supports co-translational import into mitochondria

    Chen Lesnik; Yifat Cohen; Avigail Atir-Lande; Maya Schuldiner; Yoav Arava (2014)
    (Publication id: 53060)
  • A shared architecture for promoters and enhancers

    Shira Weingarten-Gabbay; Eran Segal (2014)
    (Publication id: 000045015)
  • The Yeast ER-Intramembrane Protease Ypf1 Refines Nutrient Sensing by Regulating Transporter Abundance

    Doenem Avci; Shai Fuchs; Bianca Schrul; Akio Fukumori; Michal Breker; Idan Frumkin; Chia-yi Chen; Martin L. Biniossek; Elisabeth Kremmer; Oliver Schilling; Harald Steiner; Maya Schuldiner; Marius K. Lemberg (2014)
    (Publication id: 53038)
  • Reply to Metson et al.: The importance of phosphorus perturbations

    Gidon Eshel; Alon Shepon; Tamar Makov; Ron Milo (2014)
    (Publication id: 000045044)
  • Sequential Feedback Induction Stabilizes the Phosphate Starvation Response in Budding Yeast

    Noam Vardi; Sagi Levy; Yonat Gurvich; Tamar Polacheck; Miri Carmi; Diego Jaitin; Ido Amit; Naama Barkai (2014)
    (Publication id: 52901)
  • The quantified cell

    Avi Flamholz; Rob Phillips; Ron Milo (2014)
    (Publication id: 52836)
  • Identification of novel DNA-damage tolerance genes reveals regulation of translesion DNA synthesis by nucleophosmin

    Omer Ziv; Amit Zeisel; Nataly Mirlas-Neisberg; Umakanta Swain; Reinat Nevo; Chetrit, Nir Ben Chetrit; Maria Paola Martelli; Roberta Rossi; Stefan Schiesser; Christine E. Canman; Thomas Carell; Nicholas E. Geacintov; Brunangelo Falini; Eytan Domany; Zvi Livneh (2014)
    (Publication id: 52979)
  • The yeast oligopeptide transporter Opt2 is localized to peroxisomes and affects glutathione redox homeostasis

    Yael Elbaz-Alon; Bruce Morgan; Anne Clancy; Theresa N. E. Amoako; Einat Zalckvar; Tobias P. Dick; Blanche Schwappach; Maya Schuldiner (2014)
    (Publication id: 52834)
  • Systematic identification of cell size regulators in budding yeast

    Ilya Soifer; Naama Barkai (2014)
    (Publication id: 53074)
  • Manipulation of host pathways by human cytomegalovirus: insights from genome-wide studies

    Yifat Cohen; Noam Stern-Ginossar (2014)
    (Publication id: 000045118)
  • Pemphigus vulgaris is characterized by low IgG reactivities to specific self-antigens along with high IgG reactivity to desmoglein 3

    Ittai Fattal; Jacob Rimer; Noam Shental; Yair Molad; Armando Gabrielli; Avi Livneh; Ofer Sarig; Ilan Goldberg; Uzi Gafter; Eytan Domany; Irun R. Cohen (2014)
    (Publication id: 52693)
  • Transkingdom Control of Microbiota Diurnal Oscillations Promotes Metabolic Homeostasis

    Christoph Alexander Thaiss; David Zeevi; Maayan Levy; Gili Zilberman-Schapira; Jotham Suez; Anouk C. Tengeler; Lior Abramson; Meirav N. Katz; Tal Korem; Niv Zmora; Yael Kuperman; Inbal Biton; Shlomit Gilad; Alon Harmelin; Hagit Shapiro; Zamir Halpern; Eran Segal; Eran Elinav (2014)
    (Publication id: 52897)
  • Cooperativity, Specificity, and Evolutionary Stability of Polycomb Targeting in Drosophila

    Bernd Schuettengruber; Noa Oded Elkayam; Tom Sexton; Marianne Entrevan; Shani Stern; Aubin Thomas; Eitan Yaffe; Hugues Parrinello; Amos Tanay; Giacomo Cavalli (2014)
    (Publication id: 52886)
  • Artificial sweeteners induce glucose intolerance by altering the gut microbiota

    Jotham Suez; Tal Korem; David Zeevi; Gili Zilberman-Schapira; Christoph Alexander Thaiss; Ori Maza; David Israeli; Niv Zmora; Shlomit Gilad; Adina Weinberger; Yael Kuperman; Alon Harmelin; Ilana Kolodkin-Gal; Hagit Shapiro; Zamir Halpern; Eran Segal; Eran Elinav (2014)
    (Publication id: 52722)
  • Checkpoint-independent scaling of the Saccharomyces cerevisiae DNA replication program

    Ariel Gispan; Miri Carmi; Naama Barkai (2014)
    (Publication id: 52943)
  • Aging-induced immunological signature of the brain's choroid plexus negatively regulates neurogenesis and cognitive function

    Aleksandra Deczkowska; Kuti Baruch; Eyal David; Joseph M. Castellano; Omer Miller; Alexander Kertser; Tamara Berkutzki; Itzhaki, Zohar Barnett Itzhaki; Dana Bezalel; Tony Wyss-coray; Ido Amit; Michal Schwartz (2014)
    (Publication id: 000045144)
  • The central nervous system microenvironment imprints microglial inability to switch from pro- to anti-inflammatory phenotype

    Orit Matcovitch; Merav Cohen; Eyal David; Zohar Barnettitzhaki; Hadas Keren-Shaul; Ronnie Blecher-gonen; Diego Adhemar Jaitin; Antonio Sica; Ido Amit; Michal Schwartz (2014)
    (Publication id: 000045145)
  • Diurnal suppression of EGFR signalling by glucocorticoids and implications for tumour progression and treatment

    Mattia Lauriola; Yehoshua Enuka; Amit Zeisel; Gabriele D'Uva; Lee Roth; Michal Sharon-Sevilla; Moshit Lindzen; Kirti Sharma; Nava Nevo; Silvia Carvalho; Hadas Cohen-Dvashi; Merav Kedmi; Chetrit, Nir Ben Chetrit; Alon Chen; Rossella Solmi; Stefan Wiemann; Fernando Schmitt; Eytan Domany; Yosef Yarden (2014)
    (Publication id: 52857)
  • Host-parasite network structure is associated with community-level immunogenetic diversity

    Shai Pilosof; Miguel A. Fortuna; Jean-Francois Cosson; Maxime Galan; Chaisiri Kittipong; Alexis Ribas; Eran Segal; Boris R. Krasnov; Serge Morand; Jordi Bascompte (2014)
    (Publication id: 52871)
  • Hierarchy of non-glucose sugars in Escherichia coli

    Guy Aidelberg; Benjamin D. Towbin; Daphna Rothschild; Erez Dekel; Anat Bren; Uri Alon (2014)
    (Publication id: 000045521)
  • High-Resolution Sequencing and Modeling Identifies Distinct Dynamic RNA Regulatory Strategies

    Michal Rabani; Raktima Raychowdhury; Marko Jovanovic; Michael Rooney; Deborah J. Stumpo; Andrea Pauli; Nir Hacohen; Alexander F. Schier; Perry J. Blackshear; Nir Friedman; Ido Amit; Aviv Regev (2014)
    (Publication id: 000045523)
  • High-resolution metagenomics

    Eran Mick; Rotem Sorek (2014)
    (Publication id: 000045920)
  • Individuality and Togetherness in Joint Improvised Motion

    Yuval Hart; Lior Noy; Rinat Feniger-Schaal; AE Mayo; Uri Alon (2014)
    (Publication id: 000045974)
  • Coordination of Gene Expression and Growth-Rate in Natural Populations of Budding Yeast

    Zvi Tamari; D Rosin; Yoav Voichek; Naama Barkai (2014)
    (Publication id: 000045975)
  • The interplay between the innate immune system and the microbiota

    Christoph Alexander Thaiss; Moshe Levy; Jotham Suez; Eran Elinav (2014)
    (Publication id: 000045997)
  • Pathway Thermodynamics Highlights Kinetic Obstacles in Central Metabolism

    Elad Noor; Arren Bar-Even; Abraham Flamholz; E Reznik; W Liebermeister; Ron Milo (2014)
    (Publication id: 000045985)
  • Novel Superactive Leptin Antagonists and their Potential Therapeutic Applications

    A Gertler; Eran Elinav (2014)
    (Publication id: 000045987)
  • Digital cell quantification identifies global immune cell dynamics during influenza infection

    Zeev Altboum; Y Steuerman; Eyal David; Itzhaki, Zohar Barnett Itzhaki; Liran Valadarsky; Hadas Keren-Shaul; T Meningher; E Mendelson; M Mandelboim; I Gat-Viks; Ido Amit (2014)
    (Publication id: 000046004)
  • 4sUDRB-seq: measuring genomewide transcriptional elongation rates and initiation frequencies within cells

    Gilad Fuchs; Yoav Voichek; Sima Benjamin; Sharon Gilad; Ido Amit; Moshe Oren (2014)
    (Publication id: 000046127)
  • Lucky iPSCs

    Asaf Zviran; JH Hanna (2014)
    (Publication id: 000046128)
  • Inflammasomes and Metabolic Disease

    J Henao-Mejia; Eran Elinav; Christoph Alexander Thaiss; RA Flavell (2014)
    (Publication id: 000046146)
  • Peroxisomes are juxtaposed to strategic sites on mitochondria

    Yonatan Cohen; YA Klug; L Dimitrov; Zohar Erez; SG Chuartzman; Dalia Elinger; Ido Yofe; K Soliman; J Gartner; S Thoms; R Schekman; Y Elbaz-Alon; Einat Zalckvar; Maya Schuldiner (2014)
    (Publication id: 000046150)
  • A Comprehensive tRNA Deletion Library Unravels the Genetic Architecture of the tRNA Pool

    Z Bloom-Ackermann; Sivan Navon; Hila Gingold; Ruth Towers; Yitzhak Pilpel; Orna Dahan (2014)
    (Publication id: 000046156)
  • All roads lead to Rome-SRP independent translocation into the endoplasmic reticulum

    Tslil Ast; Maya Schuldiner (2014)
    (Publication id: 000046194)
  • Defining the adaptor function of endocytic protein Syp1.

    K Hoban; AR Apel; S Chuartzman; Maya Schuldiner; B Wendland (2014)
    (Publication id: 000046196)
  • COMBINATION OF GENE COPY GAIN AND EPIGENETIC DEREGULATION ARE ASSOCIATED WITH THE ABERRANT EXPRESSION OF A STEM CELL RELATED HOX-SIGNATURE IN GLIOBLASTOMA

    S Kurscheid; P Bady; D Sciuscio; I Samarzija; Tal Shay; I Vassallo; Criekinge, W Van Criekinge; Eytan Domany; R Stupp; M Delorenzi; M Hegi (2014)
    (Publication id: 000046216)
  • Plasticity in the transcriptional and epigenetic circuits regulating dendritic cell lineage specification and function

    Franziska Paul; Ido Amit (2014)
    (Publication id: 000046233)
  • The cross talk between microbiota and the immune system: metabolites take center stage

    Hagit Shapiro; Christoph Alexander Thaiss; Moshe Levy; Eran Elinav (2014)
    (Publication id: 000046234)
  • Pregnancy-Associated Listeriosis: Clinical Characteristics and Geospatial Analysis of a 10-Year Period in Israel

    H Elinav; A Hershko-Klement; L Valinsky; J Jaffe; A Wiseman; Hila Shimon; E Braun; Y Paitan; C Block; Rotem Sorek; R Nir-Paz (2014)
    (Publication id: 000046238)
  • Probing the effect of promoters on noise in gene expression using thousands of designed sequences

    Eilon Sharon; Dijk, David Van Dijk; Yael Kalma; L Keren; Ohad Manor; Z Yakhini; Eran Segal (2014)
    (Publication id: 000046252)
  • A Dual Program for Translation Regulation in Cellular Proliferation and Differentiation

    Hila Gingold; D Tehler; NR Christoffersen; MM Nielsen; F Asmar; SM Kooistra; NS Christophersen; LL Christensen; M Borre; KD Sorensen; LD Andersen; CL Andersen; E Hulleman; T Wurdinger; E Ralfkiaer; K Helin; K Gronbaek; T Omtoft; SM Waszak; Orna Dahan; JS Pedersen; AH Lund; Yitzhak Pilpel (2014)
    (Publication id: 000046269)
  • Single-cell RNA-seq reveals dynamic paracrine control of cellular variation

    Alex K. Shalek; Rahul Satija; Joe Shuga; John J. Trombetta; Dave Gennert; Diana Lu; Peilin Chen; Rona S. Gertner; Jellert T. Gaublomme; Nir Yosef; Schraga Schwartz; Brian Fowler; Suzanne Weaver; Jing Wang; Xiaohui Wang; Ruihua Ding; Raktima Raychowdhury; Nir Friedman; Nir Hacohen; Hongkun Park; Andrew P. May; Aviv Regev (2014)
    (Publication id: abefb5b6-b1f1-4922-89b7-d8973c4d7301)
  • Perturbation of m6A Writers Reveals Two Distinct Classes of mRNA Methylation at Internal and 5 ' Sites

    Schraga Schwartz; Maxwell R. Mumbach; Marko Jovanovic; Tim Wang; Karolina Maciag; G. Guy Bushkin; Philipp Mertins; Dmitry Ter-Ovanesyan; Naomi Habib; Davide Cacchiarelli; Neville E. Sanjana; Elizaveta Freinkman; Michael E. Pacold; Rahul Satija; Tarjei S. Mikkelsen; Nir Hacohen; Feng Zhang; Steven A. Carr; Eric S. Lander; Aviv Regev (2014)
    (Publication id: 2cdf2295-2e40-4a77-8b74-345e8cfb6d14)
  • Transcriptome-wide Mapping Reveals Widespread Dynamic-Regulated Pseudouridylation of ncRNA and mRNA

    Schraga Schwartz; Douglas A. Bernstein; Maxwell R. Mumbach; Marko Jovanovic; Rebecca H. Herbst; Brian X. Leon-Ricardo; Jesse M. Engreitz; Mitchell Guttman; Rahul Satija; Eric S. Lander; Gerald Fink; Aviv Regev (2014)
    (Publication id: ab902ff6-86a9-46e9-a9eb-c2534aa964b2)
  • Dynamic Profiling of the Protein Life Cycle Reveals Two Distinct Strategies for Controlling Differential Expression of Immune and Housekeeping Protein Levels in Response to Pathogens

    Marko Jovanovic; Michael Rooney; Philipp Mertins; Dariusz Przybylski; Nicolas Chevrier; Rahul Satija; Schraga Schwartz; Raktima Raychowdhury; Max Mumbach; Thomas Eisenhaure; Michal Rabani; Dave Gennert; Diana Lu; Toni Delorey; Steven A. Carr; Nir Hacohen; Aviv Regev (2014)
    (Publication id: eb82a9c4-026c-4ae9-bfc1-1242409960c6)
  • Deciphering the rules by which 5 '-UTR sequences affect protein expression in yeast

    Shlomi Dvir; Lars Velten; Eilon Sharon; Danny Zeevi; Lucas B. Carey; Adina Weinberger; Eran Segal (2013)
    (Publication id: 51202)
  • Temperature Integration: An efficient procedure for calculation of free energy differences

    Asaf Farhi; Guy Hed; Michael Bon; Nestor Caticha; Chi H. Mak; Eytan Domany (2013)
    (Publication id: 51545)
  • Pathway-based personalized analysis of cancer

    Yotam Drier; Michal Sheffer; Eytan Domany (2013)
    (Publication id: 50722)
  • Transcriptome-Wide Mapping of 5-methylcytidine RNA Modifications in Bacteria, Archaea, and Yeast Reveals m(5)C within Archaeal mRNAs

    Sarit Edelheit; Schraga Schwartz; Maxwell R. Mumbach; Omri Wurtzel; Rotem Sorek (2013)
    (Publication id: 51300)
  • Inflammation-induced cancer: crosstalk between tumours, immune cells and microorganisms

    Eran Elinav; Roni Nowarski; Christoph Alexander Thaiss; Bo Hu; Chengcheng Jin; Richard A. Flavell (2013)
    (Publication id: 000012010)
  • Harnessing Nanomedicine for Mucosal Theranostics-A Silver Bullet at Last?

    Eran Elinav; Dan Peer (2013)
    (Publication id: 50831)
  • Effects of post-transcriptional regulation on phenotypic noise in Escherichia coli

    Rinat Arbel-Goren; Asaf Tal; Tamar Friedlander; Shiri Meshner; Nina Costantino; Donald L. Court; Joel Stavans (2013)
    (Publication id: 50804)
  • A Network of Cytosolic Factors Targets SRP-Independent Proteins to the Endoplasmic Reticulum

    Tslil Ast; Galit Cohen; Maya Schuldiner (2013)
    (Publication id: 50697)
  • All roads lead to Rome (but some may be harder to travel): SRP-independent translocation into the endoplasmic reticulum

    Tslil Ast; Maya Schuldiner (2013)
    (Publication id: 50877)
  • Increasing population growth by asymmetric segregation of a limiting resource during cell division

    Nurit Avraham; Ilya Soifer; Miri Carmi; Naama Barkai (2013)
    (Publication id: 50824)
  • Design and analysis of metabolic pathways supporting formatotrophic growth for electricity-dependent cultivation of microbes

    Arren Bar-Even; Elad Noor; Avi Flamholz; Ron Milo (2013)
    (Publication id: 51190)
  • DEVELOPMENTAL BIOLOGY Segmentation within scale

    Naama Barkai; Ben-Zion Shilo (2013)
    (Publication id: 50230)
  • Addiction of t(8;21) and inv(16) Acute Myeloid Leukemia to Native RUNX1

    Ami, Oren Ben Ami; Dan Friedman; Dena Leshkowitz; Dalia Goldenberg; Kira Orlovsky; Niv Pencovich; Joseph Lotem; Amos Tanay; Yoram Groner (2013)
    (Publication id: 51393)
  • Formation and dissociation of Proteasome Storage Granules (PSGs) are regulated by cytosolic pH

    Shay Ben-Aroya; Lee Peters; Rotem Hazan; Michal Breker; Maya Schuldiner (2013)
    (Publication id: 000005580)
  • Mapping the translation initiation landscape of an S-cerevisiae gene using fluorescent proteins

    Tuval Ben-Yehezkel; Hadas Zur; Tzipy Marx; Ehud Shapiro; Tamir Tuller (2013)
    (Publication id: 51529)
  • The locus of microRNA-10b A critical target for breast cancer insurgence and dissemination

    Francesca Biagioni; Noa Bossel Ben-Moshe; Giulia Fontemaggi; Yosef Yarden; Eytan Domany; Giovanni Blandino (2013)
    (Publication id: 000006687)
  • High-throughput chromatin immunoprecipitation for genome-wide mapping of in vivo protein-DNA interactions and epigenomic states

    Ronnie Blecher-Gonen; Itzhaki, Zohar Barnett Itzhaki; Diego Jaitin; Zalcenstein, Daniela Amann Zalcenstein; Astiaso, David Lara Astiaso; Ido Amit (2013)
    (Publication id: 50709)
  • Individual and meta-immune networks

    Sharron Bransburg-Zabary; Dror Y. Kenett; Gittit Dar; Asaf Madi; Yifat Merbl; Francisco J. Quintana; Alfred I. Tauber; Irun R. Cohen; Eshel Ben-Jacob (2013)
    (Publication id: 50713)
  • A novel single-cell screening platform reveals proteome plasticity during yeast stress responses

    Michal Breker; Melissa Gymrek; Maya Schuldiner (2013)
    (Publication id: 50600)
  • A novel single-cell screening platform reveals proteome plasticity during yeast stress responses

    Michal Breker; Melissa Gymrek; Maya Schuldiner (2013)
    (Publication id: 000007813)
  • The last generation of bacterial growth in limiting nutrient

    Anat Bren; Yuval Hart; Erez Dekel; Daniel Koster; Uri Alon (2013)
    (Publication id: 50714)
  • Promoter Sequence Determines the Relationship between Expression Level and Noise

    Lucas B. Carey; Dijk, David Van Dijk; Peter M. A. Sloot; Jaap A. Kaandorp; Eran Segal (2013)
    (Publication id: 50825)
  • Comparing Algorithms That Reconstruct Cell Lineage Trees Utilizing Information on Microsatellite Mutations

    Ilani, Noa Chapal Ilani; Yosef E. Maruvka; Adam Spiro; Yitzhak Reizel; Rivka Adar; Liran I Shlush; Ehud Shapiro (2013)
    (Publication id: 51500)
  • Semiconductor-based DNA sequencing of histone modification states

    Christine S. Cheng; Kunal Rai; Manuel Garber; Andrew Hollinger; Dana Robbins; Scott Anderson; Alyssa Macbeth; Austin Tzou; Mauricio O. Carneiro; Raktima Raychowdhury; Carsten Russ; Nir Hacohen; Jeffrey E. Gershenwald; Niall Lennon; Chad Nusbaum; Lynda Chin; Aviv Regev; Ido Amit (2013)
    (Publication id: 51534)
  • The Yeast P5 Type ATPase, Spf1, Regulates Manganese Transport into the Endoplasmic Reticulum

    Yifat Cohen; Mrton Megyeri; Oscar C. W. Chen; Giuseppe Condomitti; Isabelle Riezman; Ursula Loizides-Mangold; Alaa Abdul-Sada; Nitzan Rimon; Howard Riezman; Frances M. Platt; Anthony H. Futerman; Maya Schuldiner (2013)
    (Publication id: 000009749)
  • Two DNA-encoded strategies for increasing expression with opposing effects on promoter dynamics and transcriptional noise

    Maya Dadiani; Dijk, David Van Dijk; Barak Segal; Yair Field; Artzi, Gil Ben Artzi; - Sadka, Tali Raveh - Sadka; Michal Levo; Irene Kaplow; Adina Weinberger; Eran Segal (2013)
    (Publication id: 50890)
  • Exploring the architecture of the tRNA pool through systematic deletion of tRNA genes

    Orna Dahan; Zohar Bloom; Sivan Navon; Yitzhak Pilpel (2013)
    (Publication id: 000010093)
  • Inferring gene expression from ribosomal promoter sequences, a crowdsourcing approach

    Pablo Meyer; Geoffrey Siwo; Danny Zeevi; Eilon Sharon; Raquel Norel; Eran Segal; Gustavo Stolovitzky (2013)
    (Publication id: 51590)
  • Holding a grudge: Persisting anti-phage CRISPR immunity in multiple human gut microbiomes

    Eran Mick; Adi Stern; Rotem Sorek (2013)
    (Publication id: 51229)
  • Mononuclear phagocyte miRNome analysis identifies miR-142 as critical regulator of murine dendritic cell homeostasis

    Alexander Mildner; Elik Chapnik; Ohad Manor; Simon Yona; Ki-Wook Kim; Tegest Aychek; Diana Varol; Gilad Beck; Zohar Barnett Itzhaki; Ester Feldmesser; Ido Amit; Eran Hornstein; Steffen Jung (2013)
    (Publication id: 50520)
  • What is the total number of protein molecules per cell volume? A call to rethink some published values

    Ron Milo (2013)
    (Publication id: 51797)
  • Entrainment of noise-induced and limit cycle oscillators under weak noise

    Namiko Mitarai; Uri Alon; Mogens H. Jensen (2013)
    (Publication id: 51234)
  • Hypomethylation marks enhancers within transposable elements

    Zohar Mukamel; Amos Tanay (2013)
    (Publication id: 000027987)
  • Single-cell Hi-C reveals cell-to-cell variability in chromosome structure

    Takashi Nagano; Yaniv Lubling; Tim J. Stevens; Stefan Schoenfelder; Eitan Yaffe; Wendy Dean; Ernest D. Laue; Amos Tanay; Peter Fraser (2013)
    (Publication id: 51427)
  • A note on the kinetics of enzyme action: A decomposition that highlights thermodynamic effects

    Elad Noor; Avi Flamholz; Wolfram Liebermeister; Arren Bar-Even; Ron Milo (2013)
    (Publication id: 000028866)
  • Consistent Estimation of Gibbs Energy Using Component Contributions

    Elad Noor; Hulda S. Haraldsdottir; Ron Milo; Ronan M. T. Fleming (2013)
    (Publication id: 51249)
  • The Role of Djp1 in Import of the Mitochondrial Protein Mim1 Demonstrates Specificity between a Cochaperone and Its Substrate Protein

    Drazen Papic; Yael Elbaz-Alon; Sophia Nina Koerdt; Karoline Leopold; Dennis Worm; Martin Jung; Maya Schuldiner; Doron Rapaport (2013)
    (Publication id: 51485)
  • Cell-Autonomous Function of Runx1 Transcriptionally Regulates Mouse Megakaryocytic Maturation

    Niv Pencovich; Ram Jaschek; Joseph Dicken; Ayelet Amit; Joseph Lotem; Amos Tanay; Yoram Groner (2013)
    (Publication id: 50927)
  • Formation and dissociation of proteasome storage granules are regulated by cytosolic pH

    Lee Zeev Peters; Rotem Hazan; Michal Breker; Maya Schuldiner; Shay Ben-Aroya (2013)
    (Publication id: 50928)
  • Get3 is a holdase chaperone and moves to deposition sites for aggregated proteins when membrane targeting is blocked

    Katie Powis; Bianca Schrul; Heather Tienson; Irina Gostimskaya; Michal Breker; Stephen High; Maya Schuldiner; Ursula Jakob; Blanche Schwappach (2013)
    (Publication id: 50648)
  • Differential Translation Tunes Uneven Production of Operon-Encoded Proteins

    Tessa E. F. Quax; Yuri I. Wolf; Jasper J. Koehorst; Omri Wurtzel; der Oost, Richard van der Oost; Wenqi Ran; Fabian Blombach; Kira S. Makarova; Stan J. J. Brouns; Anthony C. Forster; E. Gerhart H. Wagner; Rotem Sorek; Eugene V. Koonin; der Oost, John van der Oost (2013)
    (Publication id: 51346)
  • Correlated Occurrence and Bypass of Frame-Shifting Insertion-Deletions (InDels) to Give Functional Proteins

    Liat Rockah-Shmuel; Agnes Toth-Petroczy; Asaf Sela; Omri Wurtzel; Rotem Sorek; Dan Tawfik (2013)
    (Publication id: 51860)
  • Discovery of Functional Toxin/Antitoxin Systems in Bacteria by Shotgun Cloning

    Hila Sberro; Azita Leavitt; Ruth Kiro; Eugene Koh; Yoav Peleg; Udi Qimron; Rotem Sorek (2013)
    (Publication id: 50771)
  • From rags to riches - The history of the endoplasmic reticulum Preface

    Maya Schuldiner; Blanche Schwappach (2013)
    (Publication id: 000034282)
  • The Contribution of Systematic Approaches to Characterizing the Proteins and Functions of the Endoplasmic Reticulum

    Maya Schuldiner; Jonathan S. Weissman (2013)
    (Publication id: 50773)
  • The excludon: a new concept in bacterial antisense RNA-mediated gene regulation

    Nina Sesto; Omri Wurtzel; Cristel Archambaud; Rotem Sorek; Pascale Cossart (2013)
    (Publication id: 000034969)
  • Measurements of the Impact of 3 ' End Sequences on Gene Expression Reveal Wide Range and Sequence Dependent Effects

    Ophir Shalem; Lucas Carey; Danny Zeevi; Eilon Sharon; Leeat Keren; Adina Weinberger; Orna Dahan; Yitzhak Pilpel; Eran Segal (2013)
    (Publication id: 50655)
  • Single-cell sequencing-based technologies will revolutionize whole-organism science

    Ehud Shapiro; Tamir Biezuner; Sten Linnarsson (2013)
    (Publication id: 51499)
  • DNA COMPUTING Molecules reach consensus

    Ehud Shapiro; Tom Ran (2013)
    (Publication id: 51974)
  • The geometry of the Pareto front in biological phenotype space

    Hila Sheftel; Oren Shoval; Avi Mayo; Uri Alon (2013)
    (Publication id: 50957)
  • EcoTime-An intuitive quantitative sustainability indicator utilizing a time metric

    Alon Shepon; Tamar Israeli; Gidon Eshel; Ron Milo (2013)
    (Publication id: 50194)
  • Creating gradients by morphogen shuttling

    Ben-Zion Shilo; Ittah, Michal Haskel Ittah; Danny Ben-Zvi; Eyal D. Schejter; Naama Barkai (2013)
    (Publication id: 50863)
  • Response to Comment on "Evolutionary Trade-Offs, Pareto Optimality, and the Geometry of Phenotype Space"

    Oren Shoval; Hila Sheftel; Guy Shinar; Yuval Hart; Omer Ramote; Avi Mayo; Erez Dekel; Kathryn Kavanagh; Uri Alon (2013)
    (Publication id: 000036282)
  • Cohesin-mediated interactions organize chromosomal domain architecture

    Sevil Sofueva; Eitan Yaffe; Wen-Ching Chan; Dimitra Georgopoulou; Matteo Vietri Rudan; Hegias Mira-Bontenbal; Steven M. Pollard; Gary P. Schroth; Amos Tanay; Suzana Hadjur (2013)
    (Publication id: 51696)
  • CRISPR-Mediated Adaptive Immune Systems in Bacteria and Archaea

    Rotem Sorek; C. Martin Lawrence; Blake Wiedenheft (2013)
    (Publication id: 51269)
  • Determinants of nucleosome positioning

    Kevin Struhl; Eran Segal (2013)
    (Publication id: 000037759)
  • Evolutionary Tradeoffs between Economy and Effectiveness in Biological Homeostasis Systems

    Pablo Szekely; Hila Sheftel; Avi Mayo; Uri Alon (2013)
    (Publication id: 51358)
  • Chromosomal domains: epigenetic contexts and functional implications of genomic compartmentalization

    Amos Tanay; Giacomo Cavalli (2013)
    (Publication id: 50962)
  • Steady-State Metabolite Concentrations Reflect a Balance between Maximizing Enzyme Efficiency and Minimizing Total Metabolite Load

    Naama Tepper; Elad Noor; Daniel Amador-Noguez; Hulda S. Haraldsdottir; Ron Milo; Josh Rabinowitz; Wolfram Liebermeister; Tomer Shlomi (2013)
    (Publication id: 51495)
  • Budding Yeast Escape Commitment to the Phosphate Starvation Program Using Gene Expression Noise

    Noam Vardi; Sagi Levy; Michael Assaf; Miri Carmi; Naama Barkai (2013)
    (Publication id: 51615)
  • Glycolytic strategy as a tradeoff between energy yield and protein cost

    Avi Flamholz; Elad Noor; Arren Bar-Even; Wolfram Liebermeister; Ron Milo (2013)
    (Publication id: 51112)
  • Mutation Rules and the Evolution of Sparseness and Modularity in Biological Systems

    Tamar Friedlander; Avraham E. Mayo; Tsvi Tlusty; Uri Alon (2013)
    (Publication id: 51305)
  • Expression of TP53 mutation-associated microRNAs predicts clinical outcome in head and neck squamous cell carcinoma patients

    F. Ganci; A. Sacconi; N. Bossel Ben-Moshe; V. Manciocco; I. Sperduti; L. Strigari; R. Covello; M. Benevolo; E. Pescarmona; Eytan Domany; P. Muti; S. Strano; G. Spriano; G. Fontemaggi; G. Blandino (2013)
    (Publication id: 000014547)
  • c-Kit Is Suppressed in Human Colon Cancer Tissue and Contributes to L1-Mediated Metastasis

    Nancy Gavert; Anna Shvab; Michal Sheffer; Shmuel, Amir Ben Shmuel; Gal Haase; Eszter Bakos; Eytan Domany; Avri Ben-Ze'Ev (2013)
    (Publication id: 51411)
  • Deciphering molecular circuits from genetic variation underlying transcriptional responsiveness to stimuli

    Irit Gat-Viks; Nicolas Chevrier; Roni Wilentzik; Thomas Eisenhaure; Raktima Raychowdhury; Yael Steuerman; Alex K. Shalek; Nir Hacohen; Ido Amit; Aviv Regev (2013)
    (Publication id: 50729)
  • Linking the signaling cascades and dynamic regulatory networks controlling stress responses

    Anthony Gitter; Miri Carmi; Naama Barkai; Ziv Bar-Joseph (2013)
    (Publication id: 50435)
  • The Expression of the Beta Cell-Derived Autoimmune Ligand for the Killer Receptor Nkp46 Is Attenuated in Type 2 Diabetes

    Chamutal Gur; Jonatan Enk; Efraim Weitman; Etty Bachar; Yaron Suissa; Guy Cohen; Rachel Ben-Haroush Schyr; Helena Sabanay; Elad Horwitz; Benjamin Glaser; Yuval Dor; Ariel Pribluda; Jacob H. Hanna; Gill Leibowitz; Ofer Mandelboim (2013)
    (Publication id: 51312)
  • The Utility of Paradoxical Components in Biological Circuits

    Yuval Hart; Uri Alon (2013)
    (Publication id: 000018114)
  • Comparing Apples and Oranges: Fold-Change Detection of Multiple Simultaneous Inputs

    Yuval Hart; Avraham E. Mayo; Oren Shoval; Uri Alon (2013)
    (Publication id: 50733)
  • Characterization of an M28 metalloprotease family member residing in the yeast vacuole

    Karen A. Hecht; Victoria A. Wytiaz; Tslil Ast; Maya Schuldiner; Jeffrey L. Brodsky (2013)
    (Publication id: 51122)
  • Role of the intestinal microbiome in liver disease

    Jorge Henao-Mejia; Eran Elinav; Christoph Alexander Thaiss; Paula Licona-Limon; Richard A. Flavell (2013)
    (Publication id: 000018433)
  • The majority of endogenous microRNA targets within Alu elements avoid the microRNA machinery

    Yonit Hoffman; Dvir Dahary; Debora Rosa Bublik; Moshe Oren; Yitzhak Pilpel (2013)
    (Publication id: 50621)
  • Microbiota-induced activation of epithelial IL-6 signaling links inflammasome-driven inflammation with transmissible cancer

    Bo Hu; Eran Elinav; Samuel Huber; Till Strowig; Liming Hao; Anja Hafemann; Chengcheng Jin; Stephanie C. Eisenbarth; Richard A. Flavell (2013)
    (Publication id: 51126)
  • A library of programmable DNAzymes that operate in a cellular environment

    Maya Kahan-Hanum; Yehonatan Douek; Rivka Adar; Ehud Shapiro (2013)
    (Publication id: 50623)
  • A Global Transcriptional Switch between the Attack and Growth Forms of Bdellovibrio bacteriovorus

    Iris Karunker; Or Rotem; Mally Dori-Bachash; Edouard Jurkevitch; Rotem Sorek (2013)
    (Publication id: 50741)
  • Developmental bias in the evolution of phalanges

    Kathryn D. Kavanagh; Oren Shoval; Benjamin B. Winslow; Uri Alon; Brian P. Leary; Akinori Kan; Clifford J. Tabin (2013)
    (Publication id: 51571)
  • Drosophila Functional Elements Are Embedded in Structurally Constrained Sequences

    Ephraim Kenigsberg; Amos Tanay (2013)
    (Publication id: 000021312)
  • Fixated on fixation: using ChIP to interrogate the dynamics of chromatin interactions

    Leeat Keren; Eran Segal (2013)
    (Publication id: 000021319)
  • Promoters maintain their relative activity levels under different growth conditions

    Leeat Keren; Ora Zackay; Maya Lotan-Pompan; Uri Barenholz; Erez Dekel; Vered Sasson; Guy Aidelberg; Anat Bren; Danny Zeevi; Adina Weinberger; Uri Alon; Ron Milo; Eran Segal (2013)
    (Publication id: 51572)
  • Epidermal Growth-Factor - Induced Transcript Isoform Variation Drives Mammary Cell Migration

    Wolfgang J. Koestler; Amit Zeisel; Cindy Koerner; Jonathan M. Tsai; Jasmine Jacob-Hirsch; Chetrit, Nir Ben Chetrit; Kirti Sharma; Hadas Cohen-Dvashi; Assif Yitzhaky; Eric Lader; Ulrich Tschulena; Gideon Rechavi; Eytan Domany; Stefan Wiemann; Yosef Yarden (2013)
    (Publication id: 51664)
  • Extracting Insight from Noisy Cellular Networks

    Christian R. Landry; Emmanuel Doram Levy; Rabbo, Diala Abd Rabbo; Kirill Tarassov; Stephen W. Michnick (2013)
    (Publication id: 000023214)
  • Quantifying Translational Coupling in E. coli Synthetic Operons Using RBS Modulation and Fluorescent Reporters

    Karp, Ayelet Levin Karp; Uri Barenholz; Tasneem Bareia; Michal Dayagi; Lior Zelcbuch; Niv Antonovsky; Elad Noor; Ron Milo (2013)
    (Publication id: 51138)
  • Sequence features of yeast and human core promoters that are predictive of maximal promoter activity

    Shai Lubliner; Leeat Keren; Eran Segal (2013)
    (Publication id: 50916)
  • Single-molecule mRNA detection and counting in mammalian tissue

    Anna Lyubimova; Shalev Itzkovitz; Jan Philipp Junker; Zi Peng Fan; Xuebing Wu; Oudenaarden, Alexander van Oudenaarden (2013)
    (Publication id: 51330)
  • Predicting Disease Risk Using Bootstrap Ranking and Classification Algorithms

    Ohad Manor; Eran Segal (2013)
    (Publication id: 51331)
  • Robust Prediction of Expression Differences among Human Individuals Using Only Genotype Information

    Ohad Manor; Eran Segal (2013)
    (Publication id: 50635)
  • Oct4 shuffles Sox partners to direct cell fate

    Abed AlFatah Mansour; Jacob H. Hanna; Unknown Weizmann (2013)
    (Publication id: 000026015)
  • A synthetic biology approach for evaluating the functional contribution of designer cellulosome components to deconstruction of cellulosic substrates

    Yael Vazana; Yoav Barak; Tamar Unger; Yoav Peleg; Melina Shamshoum; Tuval Ben-Yehezkel; Yair Mazor; Ehud Shapiro; Raphael Lamed; Ed Bayer (2013)
    (Publication id: 51779)
  • Computational evaluation of cellular metabolic costs successfully predicts genes whose expression is deleterious

    Allon Wagner; Raphy Zarecki; Leah Reshef; Camelia Gochev; Rotem Sorek; Uri Gophna; Eytan Ruppin (2013)
    (Publication id: 51619)
  • tRNA genes rapidly change in evolution to meet novel translational demands

    Avihu H. Yona; Zohar Bloom-Ackermann; Idan Frumkin; Victor Hanson-Smith; Yoav Charpak-Amikam; Qinghua Feng; Jef D. Boeke; Orna Dahan; Yitzhak Pilpel (2013)
    (Publication id: 51706)
  • Nucleosome maps of the human cytomegalovirus genome reveal a temporal switch in chromatin organization linked to a major IE protein

    Einat Zalckvar; Christina Paulus; Desiree Tillo; Alexandra Asbach-Nitzsche; Yaniv Lubling; Carla Winterling; Nicholas Strieder; Katrin Muecke; Felicia Goodrum; Eran Segal; Michael Nevels (2013)
    (Publication id: 51283)
  • An accessible database for mouse and human whole transcriptome qPCR primers

    Amit Zeisel; Assif Yitzhaky; Noa Bossel Ben-Moshe; Eytan Domany (2013)
    (Publication id: 50973)
  • qCMA: A Desktop Application for Quantitative Collective Cell Migration Analysis

    Amit Zeisel; Assif Yitzhaky; Cindy Koerner; Mattia Lauriola; Hadas Cohen-Dvashi; Wolfgang J. Koestler; Yosef Yarden; Stefan Wiemann; Eytan Domany (2013)
    (Publication id: 50551)
  • Spanning high-dimensional expression space using ribosome-binding site combinatorics

    Lior Zelcbuch; Niv Antonovsky; Arren Bar-Even; Karp, Ayelet Levin Karp; Uri Barenholz; Michal Dayagi; Wolfram Liebermeister; Avi Flamholz; Elad Noor; Shira Amram; Alexander Brandis; Tasneem Bareia; Ido Yofe; Halim Jubran; Ron Milo (2013)
    (Publication id: 50803)
  • The Intestinal Microbiota in Chronic Liver Disease

    Jorge Henao-Mejia; Eran Elinav; Christoph Alexander Thaiss; Richard A. Flavell (2013)
    (Publication id: 51123)
  • Structural, Evolutionary, and Assembly Principles of Protein Oligomerization

    Emmanuel Doram Levy; Sarah Teichmann (2013)
    (Publication id: 51139)
  • A versatile genome-scale PCR-based pipeline for high-definition DNA FISH

    Sandy Klemm; Shalev Itzkovitz; Oudenaarden, Alexander van Oudenaarden (2013)
    (Publication id: 000045898)
  • Beyond Secondary Structure: Primary-Sequence Determinants License Pri-miRNA Hairpins for Processing

    Vincent C. Auyeung; Igor Ulitsky; Sean E. McGeary; David P. Bartel (2013)
    (Publication id: 000049179)
  • lincRNAs: Genomics, Evolution, and Mechanisms

    Igor Ulitsky; David P. Bartel (2013)
    (Publication id: 000049176)
  • High-Resolution Mapping Reveals a Conserved, Widespread, Dynamic mRNA Methylation Program in Yeast Meiosis

    Schraga Schwartz; Sudeep D. Agarwala; Maxwell R. Mumbach; Marko Jovanovic; Philipp Mertins; Alexander Shishkin; Yuval Tabach; Tarjei S. Mikkelsen; Rahul Satija; Gary Ruvkun; Steven A. Carr; Eric S. Lander; Gerald R. Fink; Aviv Regev (2013)
    (Publication id: 000047964)
  • Topology of the human and mouse m(6)A RNA methylomes revealed by m(6)A-seq

    Dan Dominissini; Sharon Moshitch-Moshkovitz; Schraga Schwartz; Mali Salmon-Divon; Lior Ungar; Sivan Osenberg; Karen Cesarkas; Jasmine Jacob-Hirsch; Ninette Amariglio; Martin Kupiec; Rotem Sorek; Gideon Rechavi (2012)
    (Publication id: 49233)
  • Prediction of Microbial Growth Rate versus Biomass Yield by a Metabolic Network with Kinetic Parameters

    Roi Adadi; Benjamin Volkmer; Ron Milo; Matthias Heinemann; Tomer Shlomi (2012)
    (Publication id: 49700)
  • Widespread promoter-mediated coordination of transcription and mRNA degradation

    Mally Dori-Bachash; Ophir Shalem; Yair S. Manor; Yitzhak Pilpel; Itay Tirosh (2012)
    (Publication id: 50490)
  • Clonal allelic predetermination of immunoglobulin-kappa rearrangement

    Marganit Farago; Chaggai Rosenbluh; Maya Tevlin; Shira Fraenkel; Sharon Schlesinger; Hagit Masika; Masha Gouzman; Grace Teng; David Schatz; Yoach Rais; Jacob H. Hanna; Alexander Mildner; Steffen Jung; Gustavo Mostoslavsky; Howard Cedar; Yehudit Bergman (2012)
    (Publication id: 49928)
  • Dynamic Proteomics of Human Protein Level and Localization across the Cell Cycle

    Shlomit Farkash-Amar; Eran Eden; Ariel Cohen; Zatorsky, Naama Geva Zatorsky; Lydia Cohen; Ron Milo; Alex Sigal; Tamar Danon; Uri Alon (2012)
    (Publication id: 50344)
  • Design principles of biological circuits

    Uri Alon (2012)
    (Publication id: 000002650)
  • Regulation of signalling by microRNAs

    Roi Avraham; Yosef Yarden (2012)
    (Publication id: 48914)
  • Efficiency and specificity in microRNA biogenesis

    Omer Barad; Mati Mann; Elik Chapnik; Archana Shenoy; Robert Blelloch; Naama Barkai; Eran Hornstein (2012)
    (Publication id: 49409)
  • Rethinking glycolysis: on the biochemical logic of metabolic pathways

    Arren Bar-Even; Avi Flamholz; Elad Noor; Ron Milo (2012)
    (Publication id: 49302)
  • Thermodynamic constraints shape the structure of carbon fixation pathways

    Arren Bar-Even; Avi Flamholz; Elad Noor; Ron Milo (2012)
    (Publication id: 49573)
  • A survey of carbon fixation pathways through a quantitative lens

    Arren Bar-Even; Elad Noor; Ron Milo (2012)
    (Publication id: 49116)
  • Programmable In Vivo Selection of Arbitrary DNA Sequences

    Tuval Ben-Yehezkel; Tamir Biezuner; Gregory Linshiz; Yair Mazor; Ehud Shapiro (2012)
    (Publication id: 50232)
  • Context-specific microRNA analysis: identification of functional microRNAs and their mRNA targets

    Noa Bossel Ben-Moshe; Roi Avraham; Merav Kedmi; Amit Zeisel; Assif Yitzhaky; Yosef Yarden; Eytan Domany (2012)
    (Publication id: 49795)
  • Axonal transcription factors signal retrogradely in lesioned peripheral nerve

    Yaakov, Keren Ben Yaakov; Shachar Y. Dagan; Yael Segal-Ruder; Ophir Shalem; Deepika Vuppalanchi; Dianna E. Willis; Dmitry Yudin; Ida Rishal; Franziska Rother; Michael Bader; Armin Blesch; Yitzhak Pilpel; Jeffery L. Twiss; Mike Fainzilber (2012)
    (Publication id: 49032)
  • miR-10b*, a master inhibitor of the cell cycle, is down-regulated in human breast tumours

    Francesca Biagioni; Noa Bossel Ben-Moshe; Giulia Fontemaggi; Valeria Canu; Federica Mori; Barbara Antoniani; Benedetto, Anna Di Benedetto; Raffaela Santoro; Sabrina Germoni; Angelis, Fernanda De Angelis; Anna Cambria; Roi Avraham; Giuseppe Grasso; Sabrina Strano; Paola Muti; Marcella Mottolese; Yosef Yarden; Eytan Domany; Giovanni Blandino (2012)
    (Publication id: 49996)
  • M(odu)LLating the Innate Response

    Ronnie Blecher-Gonen; Ido Amit (2012)
    (Publication id: 49222)
  • New insights into replication origin characteristics in metazoans

    Christelle Cayrou; Philippe Coulombe; Aurore Puy; Stephanie Rialle; Noam Kaplan; Eran Segal; Marcel Mechali (2012)
    (Publication id: 48925)
  • Inferring Divergence of Context-Dependent Substitution Rates in Drosophila Genomes with Applications to Comparative Genomics

    Ran Chachick; Amos Tanay (2012)
    (Publication id: 49417)
  • Transcriptome-wide discovery of circular RNAs in Archaea

    Miri Danan; Schraga Schwartz; Sarit Edelheit; Rotem Sorek (2012)
    (Publication id: 49230)
  • RNA-seq analysis of small RNPs in Trypanosoma brucei reveals a rich repertoire of non-coding RNAs

    Shulamit Michaeli; Tirza Doniger; Sachin Kumar Gupta; Omri Wurtzel; Mali Romano; Damian Visnovezky; Rotem Sorek; Ron Unger; Elisabetta Ullu (2012)
    (Publication id: 48967)
  • Achieving Diversity in the Face of Constraints: Lessons from Metabolism

    Ron Milo; Robert L. Last (2012)
    (Publication id: 49454)
  • Interactions of subunit CCT3 in the yeast chaperonin CCT/TRiC with Q/N-rich proteins revealed by high-throughput microscopy analysis

    Holly, Michal Nadler Holly; Michal Breker; Ranit Gruber; Ariel Azia; Melissa Gymrek; Miriam Eisenstein; Keith R. Willison; Maya Schuldiner; Amnon Horovitz (2012)
    (Publication id: 50167)
  • An integrated open framework for thermodynamics of reactions that combines accuracy and coverage

    Elad Noor; Arren Bar-Even; Avi Flamholz; Yaniv Lubling; Dan Davidi; Ron Milo (2012)
    (Publication id: 49598)
  • A proof for loop-law constraints in stoichiometric metabolic networks

    Elad Noor; Nathan E. Lewis; Ron Milo (2012)
    (Publication id: 50445)
  • Efficiency in Evolutionary Trade-Offs

    Elad Noor; Ron Milo (2012)
    (Publication id: 49341)
  • Modeling ductal carcinoma in situ: a HER2-Notch3 collaboration enables luminal filling

    C-R Pradeep; W. J. Koestler; Mattia Lauriola; R. Z. Granit; F. Zhang; J. Jacob-Hirsch; G. Rechavi; H. B. Nair; B. T. Hennessy; A. M. Gonzalez-Angulo; R. R. Tekmal; I. Ben-Porath; G. B. Mills; Eytan Domany; Yosef Yarden (2012)
    (Publication id: 48975)
  • Modeling invasive breast cancer: growth factors propel progression of HER2-positive premalignant lesions

    C-R Pradeep; Amit Zeisel; W. J. Koestler; Mattia Lauriola; J. Jacob-Hirsch; B. Haibe-Kains; N. Amariglio; Chetrit, Nir Ben Chetrit; Anna Maria Emde; Inna Solomonov; G. Neufeld; M. Piccart; Irit Sagi; C. Sotiriou; G. Rechavi; Eytan Domany; C. Desmedt; Yosef Yarden (2012)
    (Publication id: 49762)
  • Tracing the genesis of human embryonic stem cells

    Ariel Pribluda; Jacob H. Hanna (2012)
    (Publication id: 49076)
  • A programmable NOR-based device for transcription profile analysis

    Tom Ran; Yehonatan Douek; Lilach Milo; Ehud Shapiro (2012)
    (Publication id: 49764)
  • Disentangling signaling gradients generated by equivalent sources

    Noa Rappaport; Naama Barkai (2012)
    (Publication id: 49175)
  • Manipulating nucleosome disfavoring sequences allows fine-tune regulation of gene expression in yeast

    - Sadka, Tali Raveh - Sadka; Michal Levo; Uri Shabi; Boaz Shany; Leeat Keren; Maya Lotan-Pompan; Danny Zeevi; Eilon Sharon; Adina Weinberger; Eran Segal (2012)
    (Publication id: 49541)
  • Cell Lineage Analysis of the Mammalian Female Germline

    Yitzhak Reizel; Shalev Itzkovitz; Rivka Adar; Judith Elbaz; Adrian Jinich; Ilani, Noa Chapal Ilani; Yosef E. Maruvka; Nava Nevo; Zipora Marx; Inna Horovitz; Adam Wasserstrom; Avi Mayo; Irena Shur; Dafna Benayahu; Karl Skorecki; Eran Segal; Nava Dekel; Ehud Shapiro (2012)
    (Publication id: 48980)
  • Promoter Nucleosome Organization Shapes the Evolution of Gene Expression

    Dalia Rosin; Gil Hornung; Itay Tirosh; Ariel Gispan; Naama Barkai (2012)
    (Publication id: 49180)
  • Teasing Apart Translational and Transcriptional Components of Stochastic Variations in Eukaryotic Gene Expression

    Raheleh Salari; Damian Wojtowicz; Jie Zheng; David Levens; Yitzhak Pilpel; Teresa M. Przytycka (2012)
    (Publication id: 49766)
  • A Crossroad of microRNAs and Immediate Early Genes (IEGs) Encoding Oncogenic Transcription Factors in Breast Cancer

    Aldema Sas-Chen; Roi Avraham; Yosef Yarden (2012)
    (Publication id: 49078)
  • Mode of Regulation and the Insulation of Bacterial Gene Expression

    Vered Sasson; Irit Shachrai; Anat Bren; Erez Dekel; Uri Alon (2012)
    (Publication id: 49349)
  • From catalogue to function

    Eran Segal (2012)
    (Publication id: 49864)
  • Three-Dimensional Folding and Functional Organization Principles of the Drosophila Genome

    Tom Sexton; Eitan Yaffe; Ephraim Kenigsberg; Frederic Bantignies; Benjamin Leblanc; Michael Hoichman; Hugues Parrinello; Amos Tanay; Giacomo Cavalli (2012)
    (Publication id: 48899)
  • Uncovering the Human cell lineage tree: the next grand scientific challenge

    Ehud Shapiro (2012)
    (Publication id: 49774)
  • A mechanical Turing machine: blueprint for a biomolecular computer

    Ehud Shapiro (2012)
    (Publication id: 49466)
  • Inferring gene regulatory logic from high-throughput measurements of thousands of systematically designed promoters

    Eilon Sharon; Yael Kalma; Ayala Sharp; - Sadka, Tali Raveh - Sadka; Michal Levo; Danny Zeevi; Leeat Keren; Zohar Yakhini; Adina Weinberger; Eran Segal (2012)
    (Publication id: 49468)
  • Cell lineage analysis of acute leukemia relapse uncovers the role of replication-rate heterogeneity and microsatellite instability

    Liran I Shlush; Ilani, Noa Chapal Ilani; Rivka Adar; Neta Pery; Yosef Maruvka; Adam Spiro; Roni Shouval; Jacob M. Rowe; Maty Tzukerman; Dani Bercovich; Shai Izraeli; Guido Marcucci; Clara D. Bloomfield; Tsila Zuckerman; Karl Skorecki; Ehud Shapiro (2012)
    (Publication id: 49674)
  • Evolutionary Trade-Offs, Pareto Optimality, and the Geometry of Phenotype Space

    Oren Shoval; Hila Sheftel; Guy Shinar; Yuval Hart; Omer Ramote; Avi Mayo; Erez Dekel; K. Kavanagh; Uri Alon (2012)
    (Publication id: 49355)
  • A Genome-Wide Analysis of Promoter-Mediated Phenotypic Noise in Escherichia coli

    Olin K. Silander; Nela Nikolic; Alon Zaslaver; Anat Bren; Ilya Kikoin; Uri Alon; Martin Ackermann (2012)
    (Publication id: 48987)
  • Confinement to Organelle-Associated Inclusion Structures Mediates Asymmetric Inheritance of Aggregated Protein in Budding Yeast

    Rachel Spokoini; Ofer Moldavski; Yaakov Nahmias; Jeremy L. England; Maya Schuldiner; Daniel Kaganovich (2012)
    (Publication id: 50539)
  • CRISPR targeting reveals a reservoir of common phages associated with the human gut microbiome

    Adi Stern; Eran Mick; Itay Tirosh; Or Sagy; Rotem Sorek (2012)
    (Publication id: 49910)
  • Improved readout precision of the Bicoid morphogen gradient by early decoding

    Zvi Tamari; Naama Barkai (2012)
    (Publication id: 49192)
  • EGR1 and the ERK-ERF axis drive mammary cell migration in response to EGF

    Gabi Tarcic; Roi Avraham; Gur Pines; Ido Amit; Tal Shay; Yiling Lu; Yaara Zwang; Menachem Katz; Chetrit, Nir Ben Chetrit; Jasmine Jacob-Hirsch; Laura Virgilio; Gideon Rechavi; George Mavrothalassitis; Gordon B. Mills; Eytan Domany; Yosef Yarden (2012)
    (Publication id: 49193)
  • Robust 4C-seq data analysis to screen for regulatory DNA interactions

    de Werken, Harmen J. G. van de Werken; Gilad Landan; Sjoerd J. B. Holwerda; Michael Hoichman; Petra Klous; Ran Chachik; Erik Splinter; Christian Valdes-Quezada; Yuva Oz; Britta A. M. Bouwman; Marjon J. A. M. Verstegen; Wit, Elzo de Wit; Amos Tanay; Laat, Wouter de Laat (2012)
    (Publication id: 49957)
  • eQuilibrator-the biochemical thermodynamics calculator

    Avi Flamholz; Elad Noor; Arren Bar-Even; Ron Milo (2012)
    (Publication id: 48808)
  • RNF20 and USP44 Regulate Stem Cell Differentiation by Modulating H2B Monoubiquitylation

    Gilad Fuchs; Efrat Shema-Yaacoby; Rita Vesterman; Eran Kotler; Zohar Wolchinsky; Sylvia Wilder; Lior Golomb; Ariel Pribluda; Feng Zhang; Mahmood Haj-Yahya; Ester Feldmesser; Ashraf Brik; Xiaochun Yu; Jacob Hanna; Daniel Aberdam; Eytan Domany; Moshe Oren (2012)
    (Publication id: 49283)
  • Using bleach-chase to measure protein half-lives in living cells

    Zatorsky, Naama Geva Zatorsky; Irina Issaeva; Avi Mayo; Ariel Cohen; Erez Dekel; Tamar Danon; Lydia Cohen; Yuvalal Liron; Uri Alon; Eran Eden (2012)
    (Publication id: 49133)
  • Dynamic changes in translational efficiency are deduced from codon usage of the transcriptome

    Hila Gingold; Orna Dahan; Yitzhak Pilpel (2012)
    (Publication id: 50126)
  • Identification of CTCF as a master regulator of the clustered protocadherin genes

    Mashiach, Michal Golan Mashiach; Moshe Grunspan; Rafi Emmanuel; Liron Gibbs-Bar; Rivka Dikstein; Ehud Shapiro (2012)
    (Publication id: 49238)
  • Pharyngeal mesoderm regulatory network controls cardiac and head muscle morphogenesis

    Itamar Harel; Yoshiro Maezawa; Roi Avraham; Ariel Rinon; Hsiao-Yen Ma; Joe W. Cross; Noam Leviatan; Julius Hegesh; Achira Roy; Jasmine Jacob-Hirsch; Gideon Rechavi; Jaime Carvajal; Shubha Tole; Chrissa Kioussi; Susan Quaggin; Eldad Tzahor (2012)
    (Publication id: 50136)
  • Design principles of cell circuits with paradoxical components

    Yuval Hart; Yaron E. Antebi; Avraham E. Mayo; Nir Friedman; Uri Alon (2012)
    (Publication id: 49316)
  • Self-Organized Shuttling: Generating Sharp Dorsoventral Polarity in the Early Drosophila Embryo

    Ittah, Michal Haskel Ittah; Danny Ben-Zvi; Arieli, Merav Branski Arieli; Eyal D. Schejter; Ben-Zion Shilo; Naama Barkai (2012)
    (Publication id: 49893)
  • A Systematic Approach to Pair Secretory Cargo Receptors with Their Cargo Suggests a Mechanism for Cargo Selection by Erv14

    Yonatan Herzig; Hayley J. Sharpe; Yael Elbaz; Sean Munro; Maya Schuldiner (2012)
    (Publication id: 49436)
  • Noise-mean relationship in mutated promoters

    Gil Hornung; Raz Bar-Ziv; Dalia Rosin; Nobuhiko Tokuriki; Dan Tawfik; Moshe Oren; Naama Barkai (2012)
    (Publication id: 50141)
  • Nucleosome Organization Affects the Sensitivity of Gene Expression to Promoter Mutations

    Gil Hornung; Moshe Oren; Naama Barkai (2012)
    (Publication id: 49282)
  • A vast collection of microbial genes that are toxic to bacteria

    Aya Kimelman; Asaf Levy; Hila Sberro; Shahar Kidron; Azita Leavitt; Gil Amitai; Deborah R. Yoder-Himes; Omri Wurtzel; Yiwen Zhu; Edward M. Rubin; Rotem Sorek (2012)
    (Publication id: 49062)
  • Surface Growth of a Motile Bacterial Population Resembles Growth in a Chemostat

    Daniel A. Koster; Avraham Mayo; Anal Bren; Uri Alon (2012)
    (Publication id: 50358)
  • Ergosterol content specifies targeting of tail-anchored proteins to mitochondrial outer membranes

    Katrin Krumpe; Idan Frumkin; Yonatan Herzig; Nitzan Rimon; Cagakan Oezbalci; Britta Bruegger; Doron Rapaport; Maya Schuldiner (2012)
    (Publication id: 50266)
  • Epigenetic polymorphism and the stochastic formation of differentially methylated regions in normal and cancerous tissues

    Gilad Landan; Netta Mendelson Cohen; Zohar Mukamel; Amir Bar; Alina Molchadsky; Ran Brosh; Shirley Horn-Saban; Daniela Amann Zalcenstein; Naomi Goldfinger; Adi Zundelevich; Einav Nil Gal-Yam; Varda Rotter; Amos Tanay (2012)
    (Publication id: 50017)
  • Functional Consequences of Necdin Nucleocytoplasmic Localization

    Anat Lavi-Itzkovitz; Marianna Tcherpakov; Zehava Levy; Shalev Itzkovitz; Francoise Muscatelli; Mike Fainzilber (2012)
    (Publication id: 49327)
  • Cellular crowding imposes global constraints on the chemistry and evolution of proteomes

    Emmanuel Doram Levy; Subhajyoti De; Sarah A. Teichmann (2012)
    (Publication id: 50269)
  • Experimental evidence for Luttinger liquid behavior in sufficiently long GaAs V-groove quantum wires

    Emmanuel Doram Levy; I. Sternfeld; M. Eshkol; M. Karpovski; B. Dwir; A. Rudra; E. Kapon; Yuval Oreg; A. Palevski (2012)
    (Publication id: 48831)
  • The H3K27 demethylase Utx regulates somatic and germ cell epigenetic reprogramming

    Abed AlFatah Mansour; Ohad Gafni; Leehee Weinberger; Asaf Zviran; Muneef Ayyash; Yoach Rais; Vladislav Krupalnik; Mirie Zerbib; Zalcenstein, Daniela Amann Zalcenstein; Itay Maza; Shay Geula; Sergey Viukov; Liad Holtzman; Ariel Pribluda; Eli Canaani; Shirley Horn-Saban; Ido Amit; Noa Novershtern; Jacob H. Hanna (2012)
    (Publication id: 49666)
  • Genome-wide Measurement of RNA Folding Energies

    Yue Wan; Kun Qu; Zhengqing Ouyang; Michael Kertesz; Jun Li; Robert Tibshirani; Debora L. Makino; Robert C. Nutter; Eran Segal; Howard Y. Chang (2012)
    (Publication id: 50051)
  • Expression Noise and Acetylation Profiles Distinguish HDAC Functions

    Leehee Weinberger; Yoav Voichek; Itay Tirosh; Gil Hornung; Ido Amit; Naama Barkai (2012)
    (Publication id: 49678)
  • Comparative transcriptomics of pathogenic and non-pathogenic Listeria species

    Omri Wurtzel; Nina Sesto; J. R. Mellin; Iris Karunker; Sarit Edelheit; Christophe Becavin; Cristel Archambaud; Pascale Cossart; Rotem Sorek (2012)
    (Publication id: 49477)
  • The Single-Nucleotide Resolution Transcriptome of Pseudomonas aeruginosa Grown in Body Temperature

    Omri Wurtzel; Deborah R. Yoder-Himes; Kook Han; Ajai A. Dandekar; Sarit Edelheit; E. Peter Greenberg; Rotem Sorek; Stephen Lory (2012)
    (Publication id: 49959)
  • Chromosomal duplication is a transient evolutionary solution to stress

    Avihu H. Yona; Yair S. Manor; Rebecca H. Herbst; Gal H. Romano; Amir Mitchell; Martin Kupiec; Yitzhak Pilpel; Orna Dahan (2012)
    (Publication id: 50399)
  • Silencing of a large microRNA cluster on human chromosome 14q32 in melanoma: biological effects of mir-376a and mir-376c on insulin growth factor 1 receptor

    Liron Zehavi; Roi Avraham; Aviv Barzilai; Dalia Bar-Ilan; Roy Navon; Yechezkel Sidi; Dror Avni; Raya Leibowitz-Amit (2012)
    (Publication id: 49881)
  • The Lgr5 intestinal stem cell signature: robust expression of proposed quiescent '+4' cell markers

    de Wetering, Marc van de Wetering; Bon-Kyoung Koo; Shalev Itzkovitz; Richard Volckmann; Kevin S. Kung; Jan Koster; Sorina Radulescu; Kevin Myant; Rogier Versteeg; Owen J. Sansom; Es, Johan H. van Es; Nick Barker; Oudenaarden, Alexander van Oudenaarden; Shabaz Mohammed; Albert J. R. Heck; Hans Clevers (2012)
    (Publication id: 000045899)
  • A Critical Role for the Wnt Effector Tcf4 in Adult Intestinal Homeostatic Self-Renewal

    Shalev Itzkovitz; Bon-Kyoung Koo; Sylvia F. Boj; Jeroen Korving; den Born, Maaike van den Born; Oudenaarden, Alexander van Oudenaarden; Sylvie Robine; Hans Clevers (2012)
    (Publication id: 000045900)
  • Slug and Sox9 Cooperatively Determine the Mammary Stem Cell State

    Tsukasa Shibue; Verena Tischler; Ferenc Reinhardt; Shalev Itzkovitz; Aurelia Noske; Ursina Zuerrer-Haerdi; George Bell; Wai Leong Tam; Sendurai A. Mani; Oudenaarden, Alexander van Oudenaarden; Robert A. Weinberg (2012)
    (Publication id: 000045901)
  • Extensive alternative polyadenylation during zebrafish development

    Igor Ulitsky; Alena Shkumatava; Calvin H. Jan; Alexander O. Subtelny; David Koppstein; George W. Bell; Hazel Sive; David P. Bartel (2012)
    (Publication id: 000049184)
  • Differential GC Content between Exons and Introns Establishes Distinct Strategies of Splice-Site Recognition

    Maayan Amit; Maya Donyo; Dror Hollander; Amir Goren; Eddo Kim; Sahar Gelfman; Galit Lev-Maor; David Burstein; Schraga Schwartz; Benny Postolsky; Tal Pupko; Gil Ast (2012)
    (Publication id: 000047966)
  • Changes in exon-intron structure during vertebrate evolution affect the splicing pattern of exons

    Sahar Gelfman; David Burstein; Osnat Penn; Anna Savchenko; Maayan Amit; Schraga Schwartz; Tal Pupko; Gil Ast (2012)
    (Publication id: 000047967)