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All Publications

  • TET2 and TET3 loss disrupts small intestine differentiation and homeostasis

    Authors: Ansari I., Solé-Boldo L., Ridnik M., Gutekunst J., Gilliam O., Korshko M., Liwinski T., Jickeli B., Weinberg-Corem N., Shoshkes-Carmel M., Pikarsky E., Elinav E., Lyko F. & Bergman Y. (2023), Nature Communications. 14, 1, 4005

  • A non-antibiotic-disrupted gut microbiome is associated with clinical responses to CD19-CAR-T cell cancer immunotherapy

    Authors: Stein-Thoeringer C. K., Saini N. Y., Zamir E., Blumenberg V., Schubert M. L., Mor U., Fante M. A., Schmidt S., Hayase E., Hayase T., Rohrbach R., Chang C. C., McDaniel L., Flores I., Gaiser R., Edinger M., Wolff D., Heidenreich M., Strati P., Nair R., Chihara D., Fayad L. E., Ahmed S., Iyer S. P., Steiner R. E., Jain P., Nastoupil L. J., Westin J., Arora R., Wang M. L., Turner J., Menges M., Hidalgo-Vargas M., Reid K., Dreger P., Schmitt A., Müller-Tidow C., Locke F. L., Davila M. L., Champlin R. E., Flowers C. R., Shpall E. J., Poeck H., Neelapu S. S., Schmitt M., Subklewe M., Jain M. D., Jenq R. R. & Elinav E. (2023), Nature Medicine. 29, 4, p. 906-916

  • Dietary fibers & immunity-more than meets the eye

    Authors: Cohen Y. & Elinav E. (2023), Cell Research.

  • Microbiota-dependent and -independent postnatal development of salivary immunity

    Authors: Zubeidat K., Jaber Y., Saba Y., Barel O., Naamneh R., Netanely Y., Horev Y., Eli-berchoer L., Shhadeh A., Yosef O., Arbib E., Betser-Cohen G., Nadler C., Shapiro H., Elinav E., Aframian D. J., Wilensky A. & Hovav A. (2023), Cell reports (Cambridge). 42, 1, 111981

  • Impact of caloric restriction on the gut microbiota

    Authors: Kern L., Kviatcovsky D., He Y. & Elinav E. (2023), Current Opinion in Microbiology. 73, 102287

  • Intestinal B cells license metabolic T-cell activation in NASH microbiota/antigen-independently and contribute to fibrosis by IgA-FcR signalling

    Authors: Kotsiliti E., Leone V., Schuehle S., Govaere O., Li H., Wolf M. J., Horvatic H., Bierwirth S., Hundertmark J., Inverso D., Zizmare L., Sarusi-Portuguez A., Gupta R., O'Connor T., Giannou A. D., Shiri A. M., Schlesinger Y., Beccaria M. G., Rennert C., Pfister D., Öllinger R., Gadjalova I., Ramadori P., Rahbari M., Rahbari N., Healy M. E., Fernández-Vaquero M., Yahoo N., Janzen J., Singh I., Fan C., Liu X., Rau M., Feuchtenberger M., Schwaneck E., Wallace S. J., Cockell S., Wilson-Kanamori J., Ramachandran P., Kho C., Kendall T. J., Leblond A. L., Keppler S. J., Bielecki P., Steiger K., Hofmann M., Rippe K., Zitzelsberger H., Weber A., Malek N., Luedde T., Vucur M., Augustin H. G., Flavell R., Parnas O., Rad R., Pabst O., Henderson N. C., Huber S., Macpherson A., Knolle P., Claassen M., Geier A., Trautwein C., Unger K., Elinav E., Waisman A., Abdullah Z., Haller D., Tacke F., Anstee Q. M. & Heikenwalder M. (2023), Journal of Hepatology. 79, 2, p. 296-313

  • Engineering bacteria to modulate host metabolism

    Authors: Ciocan D. & Elinav E. (2023), Acta Physiologica. 238, 3, e14001

  • Questioning the fetal microbiome illustrates pitfalls of low-biomass microbial studies

    Authors: Kennedy K. M., de Goffau M. C., Perez-Muñoz M. E., Arrieta M., Bäckhed F., Bork P., Braun T., Bushman F. D., Dore J., de Vos W. M., Earl A. M., Eisen J. A., Elovitz M. A., Ganal-Vonarburg S. C., Gänzle M. G., Garrett W. S., Hall L. J., Hornef M. W., Huttenhower C., Konnikova L., Lebeer S., Macpherson A. J., Massey R. C., McHardy A. C., Koren O., Lawley T. D., Ley R. E., O'Mahony L., O'Toole P. W., Pamer E. G., Parkhill J., Raes J., Rattei T., Salonen A., Segal E., Segata N., Shanahan F., Sloboda D. M., Smith G. C. S., Sokol H., Spector T. D., Surette M. G., Tannock G. W., Walker A. W., Yassour M. & Walter J. (2023), Nature (London). 613, 7945, p. 639-649

  • Impact of dietary interventions on pre-diabetic oral and gut microbiome, metabolites and cytokines

    Authors: Shoer S., Shilo S., Godneva A., Ben-Yacov O., Rein M., Wolf B. C., Lotan-Pompan M., Bar N., Weiss E. I., Houri-Haddad Y., Pilpel Y., Weinberger A. & Segal E. (2023), Nature Communications. 14, 5384

  • Gut microbiome modulates the effects of a personalised postprandial-targeting (PPT) diet on cardiometabolic markers: a diet intervention in pre-diabetes

    Authors: Ben-Yacov O., Godneva A., Rein M., Shilo S., Lotan-Pompan M., Weinberger A. & Segal E. (2023), Gut. 329201

  • CAR-T Cell Therapy and the Gut Microbiota

    Authors: Asokan S., Cullin N., Stein-Thoeringer C. K. & Elinav E. (2023), Cancers. 15, 3, 794

  • Tissue-specific macrophage immunometabolism

    Authors: Ben-Arosh H. & Avraham R. (2023), Current Opinion in Immunology. 84, 102369

  • Immunometabolism at the crossroads of obesity and cancer—a Keystone Symposia report

    Authors: Cable J., Rathmell J. C., Pearce E. L., Ho P. C., Haigis M. C., Mamedov M. R., Wu M. J., Kaech S. M., Lynch L., Febbraio M. A., Bapat S. P., Hong H. S., Zou W., Belkaid Y., Sullivan Z. A., Keller A., Wculek S. K., Green D. R., Postic C., Amit I., Benitah S. A., Jones R. G., Reina-Campos M., Torres S. V., Beyaz S., Brennan D., O'Neill L. A., Perry R. J. & Brenner D. (2023), Annals of the New York Academy of Sciences. 1523, 1, p. 38-50

  • Plant and microbial sciences as key drivers in the development of metabolomics research

    Authors: Aharoni A., Goodacre R. & Fernie A. R. (2023), Proceedings of the National Academy of Sciences - PNAS. 120, 12, e221738312

  • Viral infection switches the balance between bacterial and eukaryotic recyclers of organic matter during coccolithophore blooms

    Authors: Vincent F., Gralka M., Schleyer G., Schatz D., Cabrera-Brufau M., Kuhlisch C., Sichert A., Vidal-Melgosa S., Mayers K., Barak-Gavish N., Flores J. M., Masdeu-Navarro M., Egge J. K., Larsen A., Hehemann J., Marrasé C., Simó R., Cordero O. X. & Vardi A. (2023), Nature Communications. 14, 510

  • Fungi and cancer

    Authors: Saftien A., Puschhof J. & Elinav E. (2023), Gut. 72, 7, p. 1410-1425

  • Mucosal transcriptomics highlight lncRNAs implicated in ulcerative colitis, Crohn disease, and celiac disease

    Authors: Braun T., Sosnovski K. E., Amir A., BenShoshan M., VanDussen K. L., Karns R., Levhar N., Abbas-Egbariya H., Hadar R., Efroni G., Castel D., Avivi C., Rosen M. J., Grifiths A. M., Walters T. D., Mack D. R., Boyle B. M., Ali S. A., Moore S. R., Schirmer M., Xavier R. J., Kugathasan S., Jegga A. G., Weiss B., Mayer C., Barshack I., Ben-Horin S., Ulitsky I., Beucher A., Ferrer J., Hyams J. S., Denson L. A. & Haberman Y. (2023), JCI insight.

  • Epithelial Nlrp10 inflammasome mediates protection against intestinal autoinflammation

    Authors: Zheng D., Mohapatra G., Kern L., He Y., Shmueli M. D., Valdés-Mas R., Kolodziejczyk A. A., Próchnicki T., Vasconcelos M. B., Schorr L., Hertel F., Lee Y. S., Rufino M. C., Ceddaha E., Shimshy S., Hodgetts R. J., Dori-Bachash M., Kleimeyer C., Goldenberg K., Heinemann M., Stettner N., Harmelin A., Shapiro H., Puschhof J., Chen M., Flavell R. A., Latz E., Merbl Y., Abdeen S. K. & Elinav E. (2023), Nature Immunology.

  • Phage-display immunoprecipitation sequencing of the antibody epitope repertoire in inflammatory bowel disease reveals distinct antibody signatures

    Authors: Bourgonje A. R., Andreu-Sánchez S., Vogl T., Hu S., Vich Vila A., Gacesa R., Leviatan S., Kurilshikov A., Klompus S., Kalka I. N., van Dullemen H. M., Weinberger A., Visschedijk M. C., Festen E. A., Faber K. N., Wijmenga C., Dijkstra G., Segal E., Fu J., Zhernakova A. & Weersma R. K. (2023), Immunity. 56, 6, p. 1393-1409.e6

  • Small Intestinal Microbiota Oscillations, Host Effects and Regulation—A Zoom into Three Key Effector Molecules

    Authors: Ratiner K., Fachler-Sharp T. & Elinav E. (2023), Biology (Basel, Switzerland). 12, 1, 142

  • Human microbiome research: Growing pains and future promises

    Authors: Puschhof J. & Elinav E. (2023), PLoS Biology. 21, 3, e3002053

  • A microbial workout

    Authors: Kviatcovsky D. & Elinav E. (2023), Cell Host & Microbe. 31, 2, p. 159-160

  • TRAF3 suppression encourages B cell recruitment and prolongs survival of microbiome-intact mice with ovarian cancer

    Authors: Zorea J., Motro Y., Mazor R. D., Carmi Y. K., Shulman Z., Mahajna J., Moran-Gilad J. & Elkabets M. (2023), Journal of Experimental and Clinical Cancer Research. 42, 107

  • Short-term dietary changes can result in mucosal and systemic immune depression

    Authors: Siracusa F., Schaltenberg N., Kumar Y., Lesker T. R., Steglich B., Liwinski T., Cortesi F., Frommann L., Diercks B. P., Bönisch F., Fischer A. W., Scognamiglio P., Pauly M. J., Casar C., Cohen Y., Pelczar P., Agalioti T., Delfs F., Worthmann A., Wahib R., Jagemann B., Mittrücker H. W., Kretz O., Guse A. H., Izbicki J. R., Lassen K. G., Strowig T., Schweizer M., Villablanca E. J., Elinav E., Huber S., Heeren J. & Gagliani N. (2023), Nature Immunology. 24, 9, p. 1473-1486

  • Diversity of the Pacific Ocean coral reef microbiome

    Authors: Galand P. E., Ruscheweyh H. J., Salazar G., Hochart C., Henry N., Hume B. C., Oliveira P. H., Perdereau A., Labadie K., Belser C., Boissin E., Romac S., Poulain J., Bourdin G., Iwankow G., Moulin C., Armstrong E. J., Paz-García D. A., Ziegler M., Agostini S., Banaigs B., Boss E., Bowler C., de Vargas C., Douville E., Flores M., Forcioli D., Furla P., Gilson E., Lombard F., Pesant S., Reynaud S., Thomas O. P., Troublé R., Zoccola D., Voolstra C. R., Thurber R. V., Sunagawa S., Wincker P., Allemand D. & Planes S. (2023), Nature Communications. 14, 3039

  • Calcium carbonate mineralization is essential for biofilm formation and lung colonization

    Authors: Cohen-Cymberknoh M., Kolodkin-Gal D., Keren-Paz A., Peretz S., Brumfeld V., Kapishnikov S., Suissa R., Shteinberg M., McLeod D., Maan H., Patrauchan M., Zamir G., Kerem E. & Kolodkin-Gal I. (2022), iScience. 25, 5, 104234

  • Microbiome-phage interactions in inflammatory bowel disease

    Authors: Federici S., Kviatcovsky D., Valdés-Mas R. & Elinav E. (2022), Clinical Microbiology and Infection.

  • An expanded reference map of the human gut microbiome reveals hundreds of previously unknown species

    Authors: Leviatan S., Shoer S., Rothschild D., Gorodetski M. & Segal E. (2022), Nature Communications. 13, 1, 3863

  • Urbanization comprehensively impairs biological rhythms in coral holobionts

    Authors: Rosenberg Y., Simon-Blecher N., Lalzar M., Yam R., Shemesh A., Alon S., Perna G., Cardenas A., Voolstra C. R., Miller D. J. & Levy O. (2022), Global Change Biology. 28, 10

  • Cancer microbiome

    Authors: Zitvogel L., Straussman R., Sepich-Poore G. D., Knight R., Iliev I. D., Sears C. L., Bullman S., Jobin C. & Zarour H. M. (2022), Cancer Cell. 40, 12, p. 1443-1447

  • Systemic antibody responses against human microbiota flagellins are overrepresented in chronic fatigue syndrome patients

    Authors: Vogl T., Kalka I. N., Klompus S., Leviatan S., Weinberger A. & Segal E. (2022), Science advances. 8, 38, eabq2422

  • Antibody signatures in inflammatory bowel disease: current developments and future applications

    Authors: Bourgonje A. R., Vogl T., Segal E. & Weersma R. K. (2022), Trends in Molecular Medicine. 28, 8, p. 693-705

  • Effects of personalized diets by prediction of glycemic responses on glycemic control and metabolic health in newly diagnosed T2DM: a randomized dietary intervention pilot trial

    Authors: Rein M., Ben-Yacov O., Godneva A., Shilo S., Zmora N., Kolobkov D., Cohen-Dolev N., Wolf B., Kosower N., Lotan-Pompan M., Weinberger A., Halpern Z., Zelber-Sagi S., Elinav E. & Segal E. (2022), BMC Medicine. 20, 56

  • An Integrated View of Diatom Interactions

    Authors: Vincent F. & Bowler C. (2022), The Molecular Life of Diatoms. p. 59-86

  • BREAst Cancer Personalised NuTrition (BREACPNT): dietary intervention in breast cancer survivors treated with endocrine therapy – a protocol for a randomised clinical trial

    Authors: Rein M. S., Dadiani M., Godneva A., Bakalenik-Gavry M., Morzaev-Sulzbach D., Vachnish Y., Kolobkov D., Lotan-Pompan m., Weinberger A., Segal E. & Gal-Yam E. N. (2022), BMJ Open. 12, 11, e062498

  • Mechanisms of immune activation and regulation: lessons from melanoma

    Authors: Kalaora S., Nagler A., Wargo J. A. & Samuels Y. (2022), Nature reviews. Cancer. 22, 4, p. 195-207

  • Use of Faecal Transplantation with a Novel Diet for Mild to Moderate Active Ulcerative Colitis: The CRAFT UC Randomised Controlled Trial

    Authors: Sarbagili Shabat C., Scaldaferri F., Zittan E., Hirsch A., Mentella M. C., Musca T., Cohen N. A., Ron Y., Fliss Isakov N., Pfeffer J., Yaakov M., Fanali C., Turchini L., Masucci L., Quaranta G., Kolonimos N., Godneva A., Weinberger A., Kopylov U., Levine A. & Maharshak N. (2022), Journal of Crohn's and Colitis. 16, 3, p. 369-378

  • Resolving the conflict between antibiotic production and rapid growth by recognition of peptidoglycan of susceptible competitors

    Authors: Maan H., Itkin M., Malitsky S., Friedman J. & Kolodkin-Gal I. (2022), Nature Communications. 13, 1, 431

  • Phenotypic correlates of the working dog microbiome

    Authors: Craddock H. A., Godneva A., Rothschild D., Motro Y., Grinstein D., Lotem-Michaeli Y., Narkiss T., Segal E. & Moran-Gilad J. (2022), npj Biofilms and Microbiomes. 8, 1, 66

  • Recording bacterial responses to changes in the gut environment

    Authors: Zahavi L. & Segal E. (2022), Science (American Association for the Advancement of Science). 376, 6594, p. 697-698

  • Glucosylated nanoparticles for the oral delivery of antibiotics to the proximal small intestine protect mice from gut dysbiosis

    Authors: Zhang G., Wang Q., Tao W., Jiang W., Elinav E., Wang Y. & Zhu S. (2022), Nature Biomedical Engineering. 6, p. 867-881

  • Smoking-induced microbial dysbiosis in health and disease

    Authors: Shapiro H., Goldenberg K., Ratiner K. & Elinav E. (2022), Clinical science (1979). 136, 18, p. 1371-1387

  • A RORγt + cell instructs gut microbiota-specific T reg cell differentiation

    Authors: Kedmi R., Najar T. A., Mesa K. R., Grayson A., Kroehling L., Hao Y., Hao S., Pokrovskii M., Xu M., Talbot J., Germino J., Wang J., Lareau C. A., Satpathy A. T., Anderson M. S., Laufer T. M., Aifantis I., Bartleson J. M., Allen P. M., Paidassi H., Gardner J. M., Stoeckius M. & Littman D. R. (2022), Nature (London). 610, 7933, p. 737-

  • Personalized microbiome-driven effects of non-nutritive sweeteners on human glucose tolerance

    Authors: Suez J., Cohen Y., Valdés-Mas R., Mor U., Dori-Bachash M., Federici S., Zmora N., Leshem A., Heinemann M., Linevsky R., Zur M., Ben-Zeev Brik R., Bukimer A., Eliyahu-Miller S., Metz A., Fischbein R., Sharov O., Malitsky S., Itkin M., Stettner N., Harmelin A., Shapiro H., Stein-Thoeringer C. K., Segal E. & Elinav E. (2022), Cell. 185, 18, p. P3307-3328.E19

  • Microbiome and metabolome features of the cardiometabolic disease spectrum

    Authors: , Fromentin S., Forslund S. K., Chechi K., Bar N. & Segal E. (2022), Nature Medicine. 28, 2, p. 303-314

  • Compartmentalization of the host microbiome: how tumor microbiota shapes checkpoint immunotherapy outcome and offers therapeutic prospects

    Authors: Boesch M., Horvath L., Baty F., Pircher A., Wolf D., Spahn S., Straussman R., Tilg H. & Brutsche M. H. (2022), Journal for ImmunoTherapy of Cancer. 10, e005401

  • Macrophage metabolism in the intestine is compartment specific and regulated by the microbiota

    Authors: Scott N. A., Lawson M. A., Hodgetts R. J., Le Gall G., Hall L. J. & Mann E. R. (2022), Immunology. 166, 1, p. 138-152

  • The Gut Microbiome of Adults With Type 1 Diabetes and Its Association With the Host Glycemic Control

    Authors: Shilo S., Godneva A., Rachmiel M., Korem T., Bussi Y., Kolobkov D., Karady T., Bar N., Wolf B. C., Glantz-Gashai Y., Cohen M., Levin N. Z., Shehadeh N., Gruber N., Levran N., Koren S., Weinberger A., Pinhas-Hamiel O. & Segal E. (2022), Diabetes Care. 45, 3, dc211656

  • Metabolomic and microbiome profiling reveals personalized risk factors for coronary artery disease

    Authors: Talmor-Barkan Y., Bar N., Shaul A. A., Shahaf N., Godneva A., Bussi Y., Lotan-Pompan M., Weinberger A., Shechter A., Chezar-Azerrad C., Arow Z., Hammer Y., Chechi K., Forslund S. K., Fromentin S., Dumas M., Ehrlich S. D., Pedersen O., Kornowski R. & Segal E. (2022), Nature Medicine. 28, 2, p. 295-302

  • Local and systemic effects of microbiome‐derived metabolites

    Authors: Spivak I., Fluhr L. & Elinav E. (2022), EMBO Reports. 23, 10, e55664

  • Metaproteome plasticity sheds light on the ecology of the rumen microbiome and its connection to host traits

    Authors: Sasson G., Morais S., Kokou F., Plate K., Trautwein-Schult A., Jami E., Bayer E., Becher D. & Mizrahi I. (2022), The ISME Journal.

  • Context-dependent differences in the functional responses of Lactobacillaceae strains to fermentable sugars

    Authors: Suissa R., Oved R., Maan H., Hadad U., Gilhar O., Meijler M. M., Koren O. & Kolodkin-Gal I. (2022), Frontiers in Microbiology. 13, 949932

  • Designer Liposomic Nanocarriers Are Effective Biofilm Eradicators

    Authors: Kluzek M., Oppenheimer-Shaanan Y., Dadosh T., Morandi M. I., Avinoam O., Raanan C., Goldsmith M., Goldberg R. & Klein J. (2022), ACS Nano. 16, 10, p. 15792-15804

  • Targeted suppression of human IBD-associated gut microbiota commensals by phage consortia for treatment of intestinal inflammation

    Authors: Federici S., Kredo-Russo S., Valdes Mas R., Kviatcovsky D., Weinstock E., Matiuhin Y., Silberberg Y., Atarashi K., Furuichi M., Oka A., Liu B., Fibelman M., Weiner I., Khabra E., Cullin N., Ben-Yishai N., Inbar D., Ben David H., Nicenboim J., Kowalsman N., Lieb W., Kario E., Cohen T., Friedman Geffen Y., Zelcbuch L., Cohen A., Rappo U., Gahali-Sass I., Golembo M., Lev Goldman V., Dori-Bachash M., Shapiro H., Moresi C., Cuevas Sierra A., Mohapatra G., Kern L., Zheng D., Nobs S. P., Suez J., Harmelin A., Stettner N., Zak N., Puttagunta S., Bassan M., Honda K., Sokol H., Bang C., Franke A., Schramm C., Maharshak N., Balfour Sartor R., Sorek R. & Elinav E. (2022), Cell. 185, 16, p. 2879-2898.e24

  • Research gaps and opportunities in precision nutrition: an NIH workshop report

    Authors: Lee B. Y., Ordovás J. M., Parks E. J., Anderson C. A., Barabási A. L., Clinton S. K., de la Haye K., Duffy V. B., Franks P. W., Ginexi E. M., Hammond K. J., Hanlon E. C., Hittle M., Ho E., Horn A. L., Isaacson R. S., Mabry P. L., Malone S., Martin C. K., Mattei J., Meydani S. N., Nelson L. M., Neuhouser M. L., Parent B., Pronk N. P., Roche H. M., Saria S., Scheer F. A., Segal E., Sevick M. A., Spector T. D., Van Horn L., Varady K. A., Voruganti V. S. & Martinez M. F. (2022), The American journal of clinical nutrition. 116, 6, p. 1877-1900

  • Gastrointestinal microbiome: Evaluation of testing technologies

    Authors: Spivak I. & Elinav E. (2022), Esophageal Disease and the Role of the Microbiome. p. 147-161

  • Utilization of Host and Microbiome Features in Determination of Biological Aging

    Authors: Ratiner K., Abdeen S. K., Goldenberg K. & Elinav E. (2022), Microorganisms (Basel). 10, 3, 668

  • Plant-microbe interactions in the rhizosphere via a circular metabolic economy

    Authors: Korenblum E., Massalha H. & Aharoni A. (2022), The Plant cell. 34, 9, p. 3168-3182, koac163

  • Time-limited diets and the gut microbiota in cardiometabolic disease

    Authors: Ratiner K., Shapiro H., Goldenberg K. & Elinav E. (2022), Journal of Diabetes. 14, 6

  • New Approaches to Profile the Microbiome for Treatment of Neurodegenerative Disease

    Authors: Elmaleh D. R., Downey M. A., Kundakovic L., Wilkinson J. E., Neeman Z. & Segal E. (2022), Handbook of Microbiome and Gut-Brain-Axis in Alzheimer's Disease. Pasinetti G. M. (eds.). p. 117-145

  • Protocol for studying microbiome impact on host energy and reproduction in Drosophila

    Authors: Gnainsky Y., Itkin M., Mehlman T., Brandis A., Malitsky S. & Soen Y. (2022), STAR Protocols. 3, 2, p. 101253-101253

  • The gut metabolite indole-3 propionate promotes nerve regeneration and repair

    Authors: Serger E., Luengo-Gutierrez L., Chadwick J. S., Kong G., Zhou L., Crawford G., Danzi M. C., Myridakis A., Brandis A., Bello A. T., Müller F., Sanchez-Vassopoulos A., De Virgiliis F., Liddell P., Dumas M. E., Strid J., Mani S., Dodd D. & Di Giovanni S. (2022), Nature (London). 607, p. 585-592

  • Evidence for cutaneous dysbiosis in dystrophic epidermolysis bullosa

    Authors: Bar J., Sarig O., Lotan-Pompan M., Dassa B., Miodovnik M., Weinberger A., Sprecher E., Segal E. & Samuelov L. (2021), Clinical and Experimental Dermatology. 46, 7, p. 1223-1229

  • The microbiome and human cancer

    Authors: Sepich-Poore G. D., Zitvogel L., Straussman R., Hasty J., Wargo J. A. & Knight R. (2021), Science. 371, 6536, eabc4552

  • Remembering past infections: training exercise for gut microbes

    Authors: Nobs S. P. & Elinav E. (2021),

  • Gut microbiome and its potential link to personalized nutrition

    Authors: Kviatcovsky D., Zheng D. & Elinav E. (2021), Current Opinion in Physiology. 22, 100439

  • The gut microbiome: a key player in the complexity of amyotrophic lateral sclerosis (ALS)

    Authors: Boddy S. L., Giovannelli I., Sassani M., Cooper-Knock J., Snyder M. P., Segal E., Elinav E., Barker L. A., Shaw P. J. & McDermott C. J. (2021), BMC Medicine. 19, 1, 13

  • Personalized Postprandial Glucose Response-Targeting Diet Versus Mediterranean Diet for Glycemic Control in Prediabetes

    Authors: Ben-Yacov O., Godneva A., Rein M., Shilo S., Kolobkov D., Koren N., Cohen Dolev N., Travinsky Shmul T., Wolf B. C., Kosower N., Sagiv K., Lotan-Pompan M., Zmora N., Weinberger A., Elinav E. & Segal E. (2021), Diabetes Care. 44, 9, p. 1980-1991

  • Prediction of Personal Glycemic Responses to Food for Individuals With Type 1 Diabetes Through Integration of Clinical and Microbial Data

    Authors: Shilo S., Godneva A., Rachmiel M., Korem T., Kolobkov D., Karady T., Bar N., Wolf B. C., Glantz-Gashai Y., Cohen M., Zuckerman Levin N., Shehadeh N., Gruber N., Levran N., Koren S., Weinberger A., Pinhas-Hamiel O. & Segal E. (2021), Diabetes Care. p. dc211048-

  • 10 K: a large-scale prospective longitudinal study in Israel

    Authors: Shilo S., Bar N., Keshet A., Talmor-Barkan Y., Rossman H., Godneva A., Aviv Y., Edlitz Y., Reicher L., Kolobkov D., Wolf B. C., Lotan-Pompan M., Levi K., Cohen O., Saranga H., Weinberger A. & Segal E. (2021), European Journal of Epidemiology. 36, 11, p. 1187-1194

  • Molecular genetics for probiotic engineering: dissecting lactic acid bacteria

    Authors: Suissa R., Oved R., Jankelowitz G., Turjeman S., Koren O. & Kolodkin-Gal I. (2021), Trends in microbiology (Regular ed.). 30, 3, p. 293-306

  • An Emiliania huxleyi pan-transcriptome reveals basal strain specificity in gene expression patterns

    Authors: Feldmesser E., Ben-Dor S. & Vardi A. (2021), Scientific Reports. 11, 1, 20795

  • Bacillus subtilis Colonization of Arabidopsis thaliana Roots Induces Multiple Biosynthetic Clusters for Antibiotic Production

    Authors: Maan H., Gilhar O., Porat Z. & Kolodkin-Gal I. (2021), Frontiers in Cellular and Infection Microbiology. 11, 722778

  • Population-wide diversity and stability of serum antibody epitope repertoires against human microbiota

    Authors: Thomas V., Shelley K., Sigal L., N K. I., Adina W., Cisca W., Jingyuan F., Alexandra Z., K W. R. & Segal E. (2021), Nature Medicine. 27, 8, p. 1442-1450

  • The hygiene hypothesis, the COVID pandemic, and consequences for the human microbiome

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  • Tumor Microbiome Diversity and Composition Influence Pancreatic Cancer Outcomes

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  • Applying the handicap principle to biofilms: condition-dependent signalling in Bacillus subtilis microbial communities

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  • Extracellular Vesicles: A Prevalent Tool for Microbial Gene Delivery?

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  • Transforming medicine with the microbiome

    Authors: Zmora N., Soffer E. & Elinav E. (2019), Science Translational Medicine. 11, 477, eaaw1815

  • The gut microbiota regulates white adipose tissue inflammation and obesity via a family of microRNAs

    Authors: Virtue A. T., McCright S. J., Wright J. M., Jimenez M. T., Mowel W. K., Kotzin J. J., Joannas L., Basavappa M. G., Spencer S. P., Clark M. L., Eisennagel S. H., Williams A., Levy M., Manne S., Henrickson S. E., Wherry E. J., Thaiss C. A., Elinav E. & Henao-Mejia J. (2019), Science Translational Medicine. 11, 496, 1892

  • Helminth-Based Product and the Microbiome of Mice with Lupus

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  • Environment dominates over host genetics in shaping human gut microbiota

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  • HflXr, a homolog of a ribosome-splitting factor, mediates antibiotic resistance

    Authors: Duval M., Dar D., Carvalho F., Rocha E. P. C., Sorek R. & Cossart P. (2018), Proceedings of the National Academy of Sciences of the United States of America. 115, 52, p. 13359-13364

  • Loss of MicroRNA-21 Influences the Gut Microbiota, Causing Reduced Susceptibility in a Murine Model of Colitis

    Authors: Johnston D. G. W., Williams M. A., Thaiss C. A., Cabrera-Rubio R., Raverdeau M., McEntee C., Cotter P. D., Elinav E., O'Neill L. A. J. & Corr S. C. (2018), Journal of Crohn's and Colitis. 12, 7, p. 835-848

  • Sequential BMP7/TGF-beta 1 signaling and microbiota instruct mucosal Langerhans cell differentiation

    Authors: Capucha T., Koren N., Nassar M., Heyman O., Nir T., Levy M., Zilberman-Schapira G., Zelentova K., Eli-Berchoer L., Zenke M., Hieronymus T., Wilensky A., Bercovier H., Elinav E., Clausen B. E. & Hovav A. (2018), Journal of Experimental Medicine. 215, 2, p. 481-500

  • Microbiome-Germline Interactions and Their Transgenerational Implications

    Authors: Elgart M. & Soen Y. (2018), BioEssays. 40, 4, 1700018

  • Darwinian selection of host and bacteria supports emergence of Lamarckian-like adaptation of the system as a whole

    Authors: Osmanovic D., Kessler D. A., Rabin Y. & Soen Y. (2018), Biology Direct. 13, 24

  • Bile acids in glucose metabolism in health and disease

    Authors: Shapiro H., Kolodziejczyk A. A., Halstuch D. & Elinav E. (2018), Journal of Experimental Medicine. 215, 2, p. 383-396

  • Role of the gut microbiota in nutrition and health

    Authors: Valdes A. M., Walter L., Segal E. & Spector T. D. (2018), British Medical Journal. 361, 2179

  • A case study for late Archean and Proterozoic biogeochemical iron- and sulphur cycling in a modern habitatthe Arvadi Spring

    Authors: Koeksoy E., Halama M., Hagemann N., Weigold P. R., Laufer K., Kleindienst S., Byrne J. M., Sundman A., Hanselmann K., Halevy I., Schoenberg R., Konhauser K. O. & Kappler A. (2018), Geobiology. 16, 4, p. 353-368

  • Temporal Stability of the Healthy Human Skin Microbiome Following Dead Sea Climatotherapy

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  • Post-Antibiotic Gut Mucosal Microbiome Reconstitution Is Impaired by Probiotics and Improved by Autologous FMT

    Authors: Suez J., Zmora N., Zilberman-Schapira G., Mor U., Dori-Bachash M., Bashiardes S., Zur M., Regev-Lehavi D., Brik R. B., Federici S., Horn M., Cohen Y., Moor A. E., Zeevi D., Korem T., Kotler E., Harmelin A., Itzkovitz S., Maharshak N., Shibolet O., Pevsner-Fischer M., Shapiro H., Sharon I., Halpern Z., Segal E. & Elinav E. (2018), Cell. 174, 6, p. 1406-1423.e16

  • Probiotics administration following sleeve gastrectomy surgery: a randomized double-blind trial

    Authors: Sherf-Dagan S., Zelber-Sagi S., Zilberman-Schapira G., Webb M., Buch A., Keidar A., Raziel A., Sakran N., Goitein D., Goldenberg N., Mahdi J. A., Pevsner-Fischer M., Zmora N., Dori-Bachash M., Segal E., Elinav E. & Shibolet O. (2018), International Journal of Obesity. 42, 2, p. 147-155

  • Microbiome Influences Prenatal and Adult Microglia in a Sex-Specific Manner

    Authors: Thion M. S., Low D., Silvin A., Chen J., Grisel P., Schulte-Schrepping J., Blecher R., Ulas T., Squarzoni P., Hoeffel G., Coulpier F., Siopi E., David F. S., Scholz C., Shihui F., Lum J., Amoyo A. A., Larbi A., Poidinger M., Buttgereit A., Lledo P., Greter M., Chan J. K. Y., Amit I., Beyer M., Schultze J. L., Schlitzer A., Pettersson S., Ginhoux F. & Garel S. (2018), Cell. 172, 3, p. 500-516.e16

  • Towards utilization of the human genome and microbiome for personalized nutrition

    Authors: Bashiardes S., Godneva A., Elinav E. & Segal E. (2018), Current Opinion in Biotechnology. 51, p. 57-63

  • Hyperglycemia drives intestinal barrier dysfunction and risk for enteric infection

    Authors: Thaiss C. A., Levy M., Grosheva I., Zheng D., Soffer E., Blacher E., Braverman S., Tengeler A. C., Barak O., Elazar M., Ben-Zeev R., Lehavi-Regev D., Katz M. N., Pevsner-Fischer M., Gertler A., Halpern Z., Harmelin A., Aamar S., Serradas P., Grosfeld A., Shapiro H., Geiger B. & Elinav E. (2018), Science. 359, 6382, p. 1376-1383

  • Combining 16S rRNA gene variable regions enables high-resolution microbial community profiling

    Authors: Fuks G., Elgart M., Amir A., Zeisel A., Turnbaugh P. J., Soen Y. & Shental N. (2018), Microbiome. 6, 17

  • Assembly of Synthetic Functional Cellulosomal Structures onto the Cell Surface of Lactobacillus plantarum, a Potent Member of the Gut Microbiome

    Authors: Stern J., Morais S., Ben-David Y., Salama R., Shamshoum M., Lamed R., Shoham Y., Bayer E. A. & Mizrahi I. (2018), Applied and Environmental Microbiology. 84, 8, e00282-18

  • Spatial Reconstruction of Single Enterocytes Uncovers Broad Zonation along the Intestinal Villus Axis

    Authors: Moor A. E., Harnik Y., Ben-Moshe S., Massasa E. E., Rozenberg M., Eilam R., Halpern K. B. & Itzkovitz S. (2018), Cell. 175, 4, p. 1156-1167

  • Sporulation capability and amylosome conservation among diverse human colonic and rumen isolates of the keystone starch-degrader Ruminococcus bromii

    Authors: Mukhopadhya I., Morais S., Laverde-Gomez J., Sheridan P. O., Walker A. W., Kelly W., Klieve A. V., Ouwerkerk D., Duncan S. H., Louis P., Koropatkin N., Cockburn D., Kibler R., Cooper P. J., Sandoval C., Crost E., Juge N., Bayer E. A. & Flint H. J. (2018), Environmental Microbiology. 20, 1, p. 324-336

  • The Citrobacter rodentium type III secretion system effector EspO affects mucosal damage repair and antimicrobial responses

    Authors: Berger C. N., Crepin V. F., Roumeliotis T. I., Wright J. C., Serafini N., Pevsner-Fischer M., Yu L., Elinav E., Di Santo J. P., Choudhary J. S. & Frankel G. (2018), PLoS Pathogens. 14, 10, 1007406

  • Host genetics and microbiome associations through the lens of genome wide association studies

    Authors: Weissbrod O., Rothschild D., Barkan E. & Segal E. (2018), Current Opinion in Microbiology. 44, p. 9-19

  • Microbiome facilitated pest resistance: potential problems and uses

    Authors: Gressel J. (2018), Pest Management Science. 74, 3, p. 511-515

  • Translating microbiome futures

    Authors: Taroncher-Oldenburg G., Jones S., Blaser M., Bonneau R., Christey P., Clemente J. C., Elinav E., Ghedin E., Huttenhower C., Kelly D., Kyle D., Littman D., Maiti A., Maue A., Olle B., Segal L., Vlieg J. E. T. v. H. & Wang J. (2018), Nature Biotechnology. 36, 11, p. 1037-1042

  • High Levels of CO2 Induce Spoilage by Leuconostoc mesenteroides by Upregulating Dextran Synthesis Genes

    Authors: Dror B., Savidor A., Salam B. B., Sela N., Lampert Y., Teper-Bamnolker P., Daus A., Carmeli S., Sela (Saldinger) S. & Eshela D. (2018), Applied and Environmental Microbiology. 85, 1, UNSP e0047

  • The anti-inflammatory IFITM genes ameliorate colitis and partially protect from tumorigenesis by changing immunity and microbiota

    Authors: Alteber Z., Sharbi-Yunger A., Pevsner-Fischer M., Blat D., Roitman L., Tzehoval E., Elinav E. & Eisenbach L. (2018), Immunology and Cell Biology. 96, 3, p. 284-297

  • Personalized Gut Mucosal Colonization Resistance to Empiric Probiotics Is Associated with Unique Host and Microbiome Features

    Authors: Zmora N., Zilberman-Schapira G., Suez J., Mor U., Dori-Bachash M., Bashiardes S., Kotler E., Zur M., Regev-Lehavi D., Brik R. B., Federici S., Cohen Y., Linevsky R., Rothschild D., Moor A. E., Ben-Moshe S., Harmelin A., Itzkovitz S., Maharshak N., Shibolet O., Shapiro H., Pevsner-Fischer M., Sharon I., Halpern Z., Segal E. & Elinav E. (2018), Cell. 174, 6, p. 1388-1405.e21

  • Sieving through gut models of colonization resistance

    Authors: Mullineaux-Sanders C., Suez J., Elinav E. & Frankel G. (2018), Nature Microbiology. 3, 2, p. 132-140

  • Insights into microbial involvement in desert varnish formation retrieved from metagenomic analysis

    Authors: Lang-Yona N., Maier S., Macholdt D. S., Mueller-Germann I., Yordanova P., Rodriguez-Caballero E., Jochum K. P., Al-Amri A., Andreae M. O., Froehlich-Nowoisky J. & Weber B. (2018), Environmental Microbiology Reports. 10, 3, p. 264-271

  • The path towards microbiome-based metabolite treatment

    Authors: Suez J. & Elinav E. (2017), Nature Microbiology. 2, 6, 17075

  • Ectopic colonization of oral bacteria in the intestine drives T(H)1 cell induction and inflammation

    Authors: Atarashi K., Suda W., Luo C., Kawaguchi T., Motoo I., Narushima S., Kiguchi Y., Yasuma K., Watanabe E., Tanoue T., Thaiss C. A., Sato M., Toyooka K., Said H. S., Yamagami H., Rice S. A., Gevers D., Johnson R. C., Segre J. A., Chen K., Kolls J. K., Elinav E., Morita H., Xavier R. J., Hattori M. & Honda K. (2017), Science. 358, 6361, p. 359+

  • Inflammasomes and intestinal inflammation

    Authors: Zmora N., Levy M., Pevsner-Fischer M. & Elinav E. (2017), Mucosal Immunology. 10, 4, p. 865-883

  • Microbiome, metabolites and host immunity

    Authors: Levy M., Blacher E. & Elinav E. (2017), Current Opinion in Microbiology. 35, p. 8-15

  • Broad phylogeny and functionality of cellulosomal components in the bovine rumen microbiome

    Authors: Bensoussan L., Morais S., Dassa B., Friedman N., Henrissat B., Lombard V., Bayer E. & Mizrahi I. (2017), Environmental Microbiology. 19, 1, p. 185-197

  • How holobionts get sick-toward a unifying scheme of disease

    Authors: Pitlik S. D. & Koren O. (2017), Microbiome. 5, 64

  • Irf4-dependent CD103(+) CD11b(+) dendritic cells and the intestinal microbiome regulate monocyte and macrophage activation and intestinal peristalsis in postoperative ileus

    Authors: Pohl J., Gutweiler S., Thiebes S., Volke J. K., Klein-Hitpass L., Zwanziger D., Gunzer M., Jung S., Agace W. W., Kurts C. & Engel D. R. (2017), Gut. 66, 12, p. 2110-2120

  • Tuftsin-Phosphorylcholine Maintains Normal Gut Microbiota in Collagen Induced Arthritic Mice

    Authors: Ben-Amram H., Bashi T., Werbner N., Neuman H., Fridkin M., Blank M., Shoenfeld Y. & Koren O. (2017), Frontiers in Microbiology. 8, 1222

  • The microbiome in anti-cancer therapy

    Authors: Bashiardes S., Tuganbaev T., Federici S. & Elinav E. (2017), Seminars in Immunology. 32, C, SI, p. 74-81

  • NFIL-trating the Host Circadian Rhythm-Microbes Fine-Tune the Epithelial Clock

    Authors: Thaiss C. A., Nobs S. P. & Elinav E. (2017), Cell Metabolism. 26, 5, p. 699-700

  • GAS6 is a key homeostatic immunological regulator of host-commensal interactions in the oral mucosa

    Authors: Nassar M., Tabib Y., Capucha T., Mizraji G., Nir T., Pevsner-Fischer M., Zilberman-Schapira G., Heyman O., Nussbaum G., Bercovier H., Wilensky A., Elinav E., Burstyn-Cohen T. & Hovav A. (2017), Proceedings of the National Academy of Sciences of the United States of America. 114, 3, p. E337-E346

  • Involvement of a gut-retina axis in protection against dietary glycemia-induced age-related macular degeneration

    Authors: Rowan S., Jiang S., Korem T., Szymanski J., Chang M., Szelog J., Cassalman C., Dasuri K., McGuire C., Nagai R., Du X., Brownlee M., Rabbani N., Thornalley P. J., Baleja J. D., Deik A. A., Pierce K. A., Scott J. M., Clish C. B., Smith D. E., Weinberger A., Avnit Sagi T., Lotan-Pompan M., Segal E. & Taylor A. (2017), Proceedings of the National Academy of Sciences of the United States of America. 114, 22, p. E4472-E4481

  • Origin-Dependent Variations in the Atmospheric Microbiome Community in Eastern Mediterranean Dust Storms

    Authors: Gat D., Mazar Y., Cytryn E. & Rudich Y. (2017), Environmental Science & Technology. 51, 12, p. 6709-6718

  • Quinones are growth factors for the human gut microbiota

    Authors: Fenn K., Strandwitz P., Stewart E. J., Dimise E., Rubin S., Gurubacharya S., Clardy J. & Lewis K. (2017), Microbiome. 5

  • Post-dieting weight gain: the role of persistent microbiome changes

    Authors: Thaiss C. A., Shapiro H. & Elinav E. (2017), Future Microbiology. 12, 7, p. 555-559

  • Dysbiosis and the immune system

    Authors: Levy M., Kolodziejczyk A. A., Thaiss C. A. & Elinav E. (2017), Nature Reviews Immunology. 17, 4, p. 219-232

  • The gut microbiome and hypertension

    Authors: Pevsner-Fischer M., Blacher E., Tatirovsky E., Ben-Dov I. & Elinav E. (2017), Current Opinion in Nephrology and Hypertension. 26, 1, p. 1-8

  • Metagenomic analysis reveals unusually high incidence of proteorhodopsin genes in the ultraoligotrophic Eastern Mediterranean Sea

    Authors: Dubinsky V., Haber M., Burgsdorf I., Saurav K., Lehahn Y., Malik A., Sher D., Aharonovich D. & Steindler L. (2017), Environmental Microbiology. 19, 3, p. 1077-1090

  • Impact of cystic fibrosis disease on archaea and bacteria composition of gut microbiota

    Authors: Miragoli F., Federici S., Ferrari S., Minuti A., Rebecchi A., Bruzzese E., Buccigrossi V., Guarino A. & Callegari M. L. (2017), FEMS Microbiology Ecology. 93, 2, 230

  • The remedy within: will the microbiome fulfill its therapeutic promise?

    Authors: Thaiss C. A. & Elinav E. (2017), Journal Of Molecular Medicine-Jmm. 95, 10, p. 1021-1027

  • The Role of the Immune System in Metabolic Health and Disease

    Authors: Zmora N., Bashiardes S., Levy M. & Elinav E. (2017), Cell Metabolism. 25, 3, p. 506-521

  • Microbiome at the Frontier of Personalized Medicine

    Authors: Kashyap P. C., Chia N., Nelson H., Segal E. & Elinav E. (2017), Mayo Clinic Proceedings. 92, 12, p. 1855-1864

  • Computational prediction of regulatory, premature transcription termination in bacteria

    Authors: Millman A., Dar D., Shamir M. & Sorek R. (2017), Nucleic Acids Research. 45, 2, p. 886-893

  • Our Gut Microbiome: The Evolving Inner Self

    Authors: Kundu P., Blacher E., Elinav E. & Pettersson S. (2017), Cell. 171, 7, p. 1481-1493

  • Bread Affects Clinical Parameters and Induces Gut Microbiome-Associated Personal Glycemic Responses

    Authors: Korem T., Zeevi D., Zmora N., Weissbrod O., Bar N., Lotan-Pompan M., Avnit Sagi S. T., Kosower N., Malka G., Rein M., Suez J., Goldberg B. Z., Weinberger A., Levy A., Elinav E. & Segal E. (2017), Cell Metabolism. 25, 6, p. 1243-1253

  • Microbiome-Modulated Metabolites at the Interface of Host Immunity

    Authors: Blacher E., Levy M., Tatirovsky E. & Elinav E. (2017), Journal of Immunology. 198, 2, p. 572-580

  • Microglia development follows a stepwise program to regulate brain homeostasis.

    Authors: Matcovitch-Natan O., Winter D. R., Giladi A., Vargas Aguilar A. S., Spinrad A., Sarrazin S., Ben-Yehuda H., David E., Zelada Gonzalez G. F., Perrin P., Keren-Shaul H., Gury M., Lara-Astaiso D., Thaiss C. A., Cohen M., Bahar Halpern H. K., Baruch K., Deczkowska A., Lorenzo Vivas V. E., Itzkovitz S., Elinav E., Sieweke M. H., Schwartz M. & Amit I. (2016), Science (New York, N.Y.). 353, 6301, p. aad8670

  • Biological causal links on physiological and evolutionary time scales.

    Authors: Karmon A. & Pilpel Y. (2016), eLife. 5

  • Circulating Monocytes in between the Gut and the Mind

    Authors: Baruch K. & Schwartz M. (2016), Cell Stem Cell. 18, 6, p. 689-91, 27257756

  • Impact of gut microbiota on the fly's germ line.

    Authors: Elgart M., Stern S., Salton O., Gnainsky Y., Heifetz Y. & Soen Y. (2016), Nature Communications. 7, 11280

  • Talking about cross-talk: the immune system and the microbiome.

    Authors: Zeevi D., Korem T. & Segal E. (2016), GENOME BIOLOGY. 17, 1, p. 50, 26987366

  • Metabolites: messengers between the microbiota and the immune system

    Authors: Levy M., Thaiss C. A. & Elinav E. (2016), GENES & DEVELOPMENT. 30, 14, p. 1589-1597

  • Microbiota Diumal Rhythmicity Programs Host Transcriptome Oscillations

    Authors: Thaiss C., Levy M., Korem T., Dohnalova L., Shapiro H., Jaitin D., David E., Winter D., Gury-BenAri M., Tatirovsky E., Tuganbaev T., Federici S., Zmora N., Zeevi D., Dori-Bachash M., Pevsner-Fischer M., Kartvelishvily E., Brandis A., Harmelin A., Shibolet O., Halpern Z., Honda K., Amit I., Segal E. & Elinav E. (2016), Cell. 167, 6, p. 1495-1510.e12

  • Use of Metatranscriptomics in Microbiome Research.

    Authors: Bashiardes S., Zilberman-Schapira G. & Elinav E. (2016), Bioinformatics and Biology Insights. 10, p. 19-25

  • Expression and functioning of retinal-based proton pumps in a saltern crystallizer brine

    Authors: Oren A., Abu-Ghosh S., Argov T., Kara-Ivanov E., Shitrit D., Volpert A. & Horwitz R. (2016), Extremophiles. 20, 1, p. 69-77

  • Non-alcoholic fatty liver and the gut microbiota.

    Authors: Bashiardes S., Shapiro H., Rozin S., Shibolet O. & Elinav E. (2016), Molecular Metabolism. 5, 9, p. 782-94

  • Persistent microbiome alterations modulate the rate of post-dieting weight regain

    Authors: Thaiss C. A., Itav S., Rothschild D., Meijer M. T., Levy M., Moresi C., Dohnalová L., Braverman S., Rozin S., Malitsky S., Dori-Bachash M., Kuperman Y., Biton I., Gertler A., Harmelin A., Shapiro H., Halpern Z., Aharoni A., Segal E. & Elinav E. (2016), Nature. 540, 7634, p. 544-551

  • Taking it Personally: Personalized Utilization of the Human Microbiome in Health and Disease.

    Authors: Zmora N., Zeevi D., Korem T., Segal E. & Elinav E. (2016), Cell Host & Microbe. 19, 1, p. 12-20

  • In Vivo Analysis of Intestinal Mononuclear Phagocytes

    Authors: Curato C., Bernshtein B., Aychek T. & Jung S. (2016), Dendritic Cell Protocols. p. 255-268

  • The microbiome and innate immunity

    Authors: Thaiss C. A., Zmora N., Levy M. & Elinav E. (2016), Nature. 535, 7610, p. 65-74

  • The gut microbiome in human immunodeficiency virus infection.

    Authors: Zilberman G., Zmora N., Itav S., Bashiardes S., Elinav H. & Elinav E. (2016), BMC Medicine. 14, 1, p. 83, 27256449

  • Type I interferons and microbial metabolites of tryptophan modulate astrocyte activity and central nervous system inflammation via the aryl hydrocarbon receptor

    Authors: Rothhammer V., Mascanfroni I. D., Bunse L., Takenaka M. C., Kenison J. E., Mayo L., Chao C., Patel B., Yan R., Blain M., Alvarez J. I., Kebir H., Anandasabapathy N., Izquierdo G., Jung S., Obholzer N., Pochet N., Clish C. B., Prinz M., Prat A., Antel J. & Quintana F. J. (2016), Nature Medicine. 22, 6, p. 586-+

  • The Spectrum and Regulatory Landscape of Intestinal Innate Lymphoid Cells Are Shaped by the Microbiome.

    Authors: Gury-BenAri M., Thaiss C. A., Serafini N., Winter D. R., Giladi A., Lara Astiaso A. D., Levy M., Salame T. M., Weiner A., David E., Shapiro H., Dori-Bachash M., Pevsner-Fischer M., Lorenzo Vivas V. E., Keren-Shaul H., Paul F., Harmelin A., Eberl G., Itzkovitz S., Tanay A., Di Santo S. J. P., Elinav E. & Amit I. (2016), Cell. 166, 5, p. 1231-1246.e13

  • Role of the microbiome in non-gastrointestinal cancers.

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  • Ribosomal Antibiotics: Contemporary Challenges

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  • Effect of Dust Storms on the Atmospheric Microbiome in the Eastern Mediterranean.

    Authors: Mazar Y., Cytryn E., Erel Y. & Rudich Y. (2016), Environmental Science & Technology. 50, 8, p. 4194-4202

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  • Growth dynamics of gut microbiota in health and disease inferred from single metagenomic samples

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  • Microbiota-Modulated Metabolites Shape the Intestinal Microenvironment by Regulating NLRP6 Inflammasome Signaling.

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  • Epithelial IL-18 Equilibrium Controls Barrier Function in Colitis

    Authors: Nowarski R., Jackson R., Gagliani N., de Zoete M. R., Palm N. W., Bailis W., Low J. S., Harman C. C. D., Graham M., Elinav E. & Flavell R. A. (2015), Cell. 163, 6, p. 1444-1456

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